Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_M23
         (268 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035372-1|AAH35372.1|  788|Homo sapiens chromosome 17 open read...    32   0.29 
BC032219-1|AAH32219.2|  560|Homo sapiens C17orf28 protein protein.     32   0.29 
AK074401-1|BAB85070.1|  625|Homo sapiens protein ( Homo sapiens ...    32   0.29 
AL512603-1|CAH73715.1|  481|Homo sapiens OTU domain containing 1...    28   6.2  

>BC035372-1|AAH35372.1|  788|Homo sapiens chromosome 17 open reading
           frame 28 protein.
          Length = 788

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
 Frame = -1

Query: 253 FGVALNHPYCARVQNSLPYFPSEHHESQIDFLHP------RNFWNIGNLLFLGTVQVXPQ 92
           FGV LN PY  RV   +P F   H +  I   H       +    + + L    V V P 
Sbjct: 435 FGVRLNKPYSIRVPMDIPVFTGTHADLLIVVFHKIITSGHQRLQPLFDCLLTIVVNVSPY 494

Query: 91  LKLISQLKA 65
           LK +S + A
Sbjct: 495 LKSLSMVTA 503


>BC032219-1|AAH32219.2|  560|Homo sapiens C17orf28 protein protein.
          Length = 560

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
 Frame = -1

Query: 253 FGVALNHPYCARVQNSLPYFPSEHHESQIDFLHP------RNFWNIGNLLFLGTVQVXPQ 92
           FGV LN PY  RV   +P F   H +  I   H       +    + + L    V V P 
Sbjct: 207 FGVRLNKPYSIRVPMDIPVFTGTHADLLIVVFHKIITSGHQRLQPLFDCLLTIVVNVSPY 266

Query: 91  LKLISQLKA 65
           LK +S + A
Sbjct: 267 LKSLSMVTA 275


>AK074401-1|BAB85070.1|  625|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23821 fis, clone HUV00353. ).
          Length = 625

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
 Frame = -1

Query: 253 FGVALNHPYCARVQNSLPYFPSEHHESQIDFLHP------RNFWNIGNLLFLGTVQVXPQ 92
           FGV LN PY  RV   +P F   H +  I   H       +    + + L    V V P 
Sbjct: 435 FGVRLNKPYSIRVPMDIPVFTGTHADLLIVVFHKIITSGHQRLQPLFDCLLTIVVNVSPY 494

Query: 91  LKLISQLKA 65
           LK +S + A
Sbjct: 495 LKSLSMVTA 503


>AL512603-1|CAH73715.1|  481|Homo sapiens OTU domain containing 1
           protein.
          Length = 481

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +3

Query: 159 RKSIWLSWCSEGKYGREF 212
           R SIWLSW S G Y   F
Sbjct: 419 RPSIWLSWLSNGHYDAVF 436


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,565,022
Number of Sequences: 237096
Number of extensions: 685485
Number of successful extensions: 1211
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 76,859,062
effective HSP length: 66
effective length of database: 61,210,726
effective search space used: 1346635972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)