Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_M23
         (268 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   1.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   2.0  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    19   8.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                19   8.0  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 18  LIYSNITVKRRYGALTAFSCD-ISFSCGKT*TVPRKRRFP 134
           L++S    K+R   +T F  D ++ +C K    P KRR P
Sbjct: 370 LLFSKYDAKKRNFFITMFDLDFLTNACKKKDDKP-KRRLP 408


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 2.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 166 DFLHPRNFWNIGNLLFLGT 110
           +FL P + W IG + F  T
Sbjct: 648 EFLRPESGWAIGAMSFSAT 666


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 174 LSWCSEGKYGREF*TRAQYGWFRATP 251
           ++W    K GR      +YG+F   P
Sbjct: 46  IAWMKFDKEGRLRAINPEYGFFGVAP 71


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 199 YFPSEHHESQ 170
           Y P +HH SQ
Sbjct: 316 YHPHQHHPSQ 325


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,912
Number of Sequences: 438
Number of extensions: 1643
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5012760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)