Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_M13
         (599 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1442.14c |||adenosine 5'-monophosphoramidase|Schizosaccharom...    40   4e-04
SPCC18.09c |||conserved eukaryotic protein|Schizosaccharomyces p...    33   0.024
SPCC4G3.02 |aph1||bis|Schizosaccharomyces pombe|chr 3|||Manual         33   0.024
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe...    29   0.69 
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca...    28   1.2  
SPAC1B1.04c |||poly|Schizosaccharomyces pombe|chr 1|||Manual           27   1.6  
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||...    27   1.6  
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom...    27   1.6  
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2...    26   3.7  
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom...    25   6.4  
SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces pomb...    25   8.5  

>SPCC1442.14c |||adenosine
           5'-monophosphoramidase|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 133

 Score = 39.5 bits (88), Expect = 4e-04
 Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
 Frame = +3

Query: 114 CIFCNIINKLENTEILYEDDDVCVFRDIKPASRFHILTVPKRHIEDAKSLLSTD-KELVE 290
           CIFC I+        L E      F DI P S+ H L +PK H      L      +++ 
Sbjct: 3   CIFCKIVKGDIPCVKLAETALSLAFLDIAPTSKGHALVIPKEHAAKMHELSDESCADILP 62

Query: 291 KMLLVAKEMLIKN-NLTVSDARFGYHWPPFRSVKHLHLHTI-APESEMGL 434
            +  V K +  +N N+  ++ R  + +     V H+H H I  P  E GL
Sbjct: 63  LVKKVTKAIGPENYNVLQNNGRIAHQF-----VDHVHFHIIPKPNEEYGL 107


>SPCC18.09c |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 232

 Score = 33.5 bits (73), Expect = 0.024
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
 Frame = +3

Query: 156 ILYEDDDVCVFRDIKPASRFHILTVPKR-HIEDAKSL--LSTDKELVEKML--------- 299
           ++Y DDDV + RD+ P S+ H+L + +  H+     L  +   + LVEK++         
Sbjct: 51  VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSG 110

Query: 300 LVAKE------MLIKNNLTVSDARFGYHWPPFRSVKHLHLHTI 410
           L+  E        + N    +  + G+H  P  +  HLH+ T+
Sbjct: 111 LIFDEARNCLSQQLTNEALCNYIKVGFHAGPSMNNLHLHIMTL 153


>SPCC4G3.02 |aph1||bis|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 182

 Score = 33.5 bits (73), Expect = 0.024
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
 Frame = +3

Query: 150 TEILYEDDDVCVFRDIKPASRFHILTVPKRHIEDAKSLLSTDKELVEKMLLVAK-EMLIK 326
           +++ Y       F ++KP    H+L +P+R +   K L  T  EL +    V K + +I+
Sbjct: 14  SQVFYRTKLSAAFVNLKPILPGHVLVIPQRAVPRLKDL--TPSELTDLFTSVRKVQQVIE 71

Query: 327 NNLTVSDARFGYH--WPPFRSVKHLHLHTI 410
              + S +  G        ++V H+H+H I
Sbjct: 72  KVFSASASNIGIQDGVDAGQTVPHVHVHII 101


>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 319

 Score = 28.7 bits (61), Expect = 0.69
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = -1

Query: 491 HILWRNKPIRVFLEYHSSNQSHFRFGSYSXXXXVFYTSERWPMVSESCIAHCQIIFNK 318
           H+  +NK +   L  H +N+ HFR    S     FY      +     I+H Q   N+
Sbjct: 152 HVPCKNKKL---LREHMNNKRHFRLDPKSSEYDEFYIINYASVTKSITISHSQFAINE 206


>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
           synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 2410

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 364 WYPNLASLTVKLFLISISFATKSIFSTNSLSVDNRLL 254
           WY  L ++   +  IS+     S FS+ +LS DN L+
Sbjct: 804 WYGTLTNIDPGIHRISLKSVPTSDFSSRTLSTDNFLI 840


>SPAC1B1.04c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 604

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = +3

Query: 222 LTVPKRHIEDAKSLLSTDKELVE--KMLLVAKEMLIKNNLTVSDARFGYHWPPFRSVKHL 395
           L+  K H+   K+++STD  LVE  ++L+  +E+ I+  L    +    ++     ++ +
Sbjct: 421 LSTAKAHLTRLKTIVSTDASLVELIEVLIFNEELRIQTLLPTMLSYMVNNYESVLLMEDV 480

Query: 396 HLHTIAPESEMGLIGRMIFKKDSYWFVSPEYV 491
           +   +A + E   + R++ K + +    PEYV
Sbjct: 481 YETYLAEQVENDRLLRLLLKLE-FLDDRPEYV 511


>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 3227

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 158  YFSVFEFINYITEYAV*SGRCTRCHFTLFIYKFRIN 51
            + S F+F   I   A+  GR   CHF+  +YK  ++
Sbjct: 2957 HLSFFKFTGRIIGKALYDGRLLDCHFSRAVYKHMLH 2992


>SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1462

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 25/104 (24%), Positives = 46/104 (44%)
 Frame = +3

Query: 66   IDK*CKMTAGTPTRSHCIFCNIINKLENTEILYEDDDVCVFRDIKPASRFHILTVPKRHI 245
            I++ C+ TA  P+       N   K+E+  I   +  V   RD +  ++  +L +     
Sbjct: 825  IERFCQFTALDPSSVPGTQLNTAIKVEDRIITVSELSVRFGRDFR--AQLALLVLFWISS 882

Query: 246  EDAKSLLSTDKELVEKMLLVAKEMLIKNNLTVSDARFGYHWPPF 377
            +    + ++   LV+  + +A+  LI N+       FGY W PF
Sbjct: 883  KFGNIIDASWPLLVQLTICLARNNLIDNSFLPGFKLFGYQWFPF 926


>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 485

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 436 ISPISDSGAIVCRCKCFTLRNG 371
           I  ++D+ A +CR  C+  RNG
Sbjct: 33  IDEVNDAAAALCRVYCYLSRNG 54


>SPAC22A12.11 |dak1||dihydroxyacetone kinase
           Dak1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 580

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = +3

Query: 177 VCVFRDIKPASRFHILTVPKRHIEDAKSLLSTDKELVEKMLLVAKEMLIK 326
           +C   D+K  ++   +++ +   +D KS ++ DKE V + ++ + E LIK
Sbjct: 351 LCQPSDLKSKNKIGNVSIEEGQ-KDVKSPVTVDKEKVRQAIVNSMENLIK 399


>SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 300

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = -3

Query: 309 LPLRASSPLIPYQLIIGSWHLLYAF*VRLIYEIYSLVLYPEKHKHRRLRKVFQCFRVY 136
           +P R    LI   +I+G   ++  F    + + Y  V+Y +     R+R+ +  +++Y
Sbjct: 113 VPKRIKPFLIALPVILGVASVMLGFLAHGMNKAYGWVIYKKIGPELRMRRRYLVYKIY 170


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,588,477
Number of Sequences: 5004
Number of extensions: 56399
Number of successful extensions: 149
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)