Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_M11
(489 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 27 1.1
SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|ch... 27 1.1
SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|ch... 27 1.5
SPBP4H10.12 |||conserved protein |Schizosaccharomyces pombe|chr ... 27 2.0
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 26 2.7
SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces pomb... 25 4.6
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 25 4.6
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 25 4.6
SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyce... 25 6.1
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 6.1
SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit Cut9|... 25 6.1
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 27.5 bits (58), Expect = 1.1
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = +2
Query: 326 NSPGWSCYGLGEIKLLSHRSDSAHLCRKLHHMYHCKEDDWGFAHFI 463
N +SC + L + + + HH + + DWGF F+
Sbjct: 131 NDETYSCCAQFALSLSNVQDPTVMQINTSHHRFRSEVKDWGFTRFV 176
>SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 411
Score = 27.5 bits (58), Expect = 1.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 437 LLYSGTYDGVFCISVQNLIYVT 372
LL + Y+ V C S+QN +Y+T
Sbjct: 219 LLIASKYEEVMCPSIQNFVYMT 240
>SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 1.5
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -2
Query: 437 LLYSGTYDGVF---CISVQNLIYVTTVLSHPSRSTTSRVSYLPRYTVETHRALSAVD 276
LLYSG Y G F +S+ + Y +L++P S T S + +Y+ + R + + D
Sbjct: 255 LLYSGNYQGNFFPLFLSILCVGYYHHLLNNP--SNTELQSLIKKYSFYSERLVKSAD 309
>SPBP4H10.12 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 171
Score = 26.6 bits (56), Expect = 2.0
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 434 LYSGTYDGVFCISVQNLIYVTTVL 363
L SG GVFCISV+ LI T+L
Sbjct: 144 LTSGIQIGVFCISVRFLITHLTIL 167
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 26.2 bits (55), Expect = 2.7
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +2
Query: 50 AAGMIETSSGENPSPLPPSTELTQEDEDIAKPEATFRFIVHNISQLKEQVLS 205
A GM + S +PS PS+ ++ + EA + H++ K++ L+
Sbjct: 52 AEGMNKDESAPSPSTSSPSSASSRSQSKYVRKEALPPQLFHHLDSAKDKALT 103
>SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 600
Score = 25.4 bits (53), Expect = 4.6
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 110 ELTQEDEDIAKPEATFRFIVHNISQL 187
+L ++ ED+ E + RF++H +S L
Sbjct: 135 QLVKDSEDVQSVEISLRFVLHFVSFL 160
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 25.4 bits (53), Expect = 4.6
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Frame = +2
Query: 62 IETSSGENPSPLP--PSTELTQEDEDIAKPEATF----RFIVHNISQLKE--QVLSPPC- 214
I SS ++PSP P ST L + +KP F F++ ++S + + L+ C
Sbjct: 36 INPSSFQSPSPSPFASSTSLASKPARYSKPLGLFVLDTNFLLSHLSLCQNLIEFLTARCP 95
Query: 215 -YVRCLPWKIL 244
V LPW +L
Sbjct: 96 RLVVVLPWTVL 106
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 25.4 bits (53), Expect = 4.6
Identities = 14/48 (29%), Positives = 18/48 (37%)
Frame = +2
Query: 68 TSSGENPSPLPPSTELTQEDEDIAKPEATFRFIVHNISQLKEQVLSPP 211
T G+ P LT A+PEA + +HN Q PP
Sbjct: 61 TKKGQATIPFTNFYPLTAPPPYTAEPEARYNSTIHNPMPPMSQAYRPP 108
>SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 563
Score = 25.0 bits (52), Expect = 6.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 381 DQILHTYAENSIICTTVKKMTGALLISS 464
DQ+LH YA++ T V GA L+SS
Sbjct: 282 DQVLHFYADHLTELTDV-SFQGAFLVSS 308
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 25.0 bits (52), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +2
Query: 53 AGMIETSSGENPSPLPP--STELTQEDED 133
+ ++E S +N SPLPP S +QE+E+
Sbjct: 313 SNIVENPSEDNLSPLPPPASGPYSQEEEE 341
>SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit
Cut9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 25.0 bits (52), Expect = 6.1
Identities = 16/66 (24%), Positives = 25/66 (37%)
Frame = +2
Query: 212 CYVRCLPWKILVLIRHTTTPERQQQKALGVFLQCNGEGNSPGWSCYGLGEIKLLSHRSDS 391
C V+ W+ + + T P R+ +K L +G CY G++ D
Sbjct: 159 CLVKLYDWQGALNLLGETNPFRKDEKNANKLLMQDGGIKLEASMCYLRGQVYTNLSNFDR 218
Query: 392 AHLCRK 409
A C K
Sbjct: 219 AKECYK 224
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,093,878
Number of Sequences: 5004
Number of extensions: 43221
Number of successful extensions: 120
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 190087364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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