BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_M08
(512 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011077-1|AAR82743.1| 719|Drosophila melanogaster SD01953p pro... 105 4e-23
AY094941-1|AAM11294.1| 720|Drosophila melanogaster RH56077p pro... 105 4e-23
AE014297-960|AAF54393.1| 720|Drosophila melanogaster CG9379-PA ... 105 4e-23
AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA... 28 8.5
AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB... 28 8.5
>BT011077-1|AAR82743.1| 719|Drosophila melanogaster SD01953p
protein.
Length = 719
Score = 105 bits (252), Expect = 4e-23
Identities = 66/164 (40%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Frame = +1
Query: 25 VRHFLIEPTARGVRLRGCPDEPVFSSLSALVYQHXXXXXXXXXXXXXXXXXXWXXXXXXX 204
VRHFLIEPT GV L+GC DEPVF+SLSALV++H
Sbjct: 508 VRHFLIEPTKGGVHLKGCDDEPVFTSLSALVFEHSISQLALPCLLRLPDRDIVPPVRATT 567
Query: 205 XXXXXXXXXXXC-HVLLLGSENTEALTGPAAVKRAVGNILNKKG-PAHV-VHFKVFGGGI 375
+VL L S +TE+LTG A+++A+ + ++ P VHFKV GI
Sbjct: 568 PAQQHLLAHGAATNVLWLYSCDTESLTGNEAIRKAIRQMYGQQPLPQPTEVHFKVSSQGI 627
Query: 376 TLTDAARKLFFRRHYPTNGISYAGIDPDERRYTYVDXGAQSDKR 507
TLTD RK FFR+HY + IS+ IDP+ R +T +SDK+
Sbjct: 628 TLTDNTRKKFFRKHYKADVISHCAIDPENRMWT---SEGESDKK 668
>AY094941-1|AAM11294.1| 720|Drosophila melanogaster RH56077p
protein.
Length = 720
Score = 105 bits (252), Expect = 4e-23
Identities = 66/164 (40%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Frame = +1
Query: 25 VRHFLIEPTARGVRLRGCPDEPVFSSLSALVYQHXXXXXXXXXXXXXXXXXXWXXXXXXX 204
VRHFLIEPT GV L+GC DEPVF+SLSALV++H
Sbjct: 509 VRHFLIEPTKGGVHLKGCDDEPVFTSLSALVFEHSISQLALPCLLRLPDRDIVPPVRATT 568
Query: 205 XXXXXXXXXXXC-HVLLLGSENTEALTGPAAVKRAVGNILNKKG-PAHV-VHFKVFGGGI 375
+VL L S +TE+LTG A+++A+ + ++ P VHFKV GI
Sbjct: 569 PAQQHLLAHGAATNVLWLYSCDTESLTGNEAIRKAIRQMYGQQPLPQPTEVHFKVSSQGI 628
Query: 376 TLTDAARKLFFRRHYPTNGISYAGIDPDERRYTYVDXGAQSDKR 507
TLTD RK FFR+HY + IS+ IDP+ R +T +SDK+
Sbjct: 629 TLTDNTRKKFFRKHYKADVISHCAIDPENRMWT---SEGESDKK 669
>AE014297-960|AAF54393.1| 720|Drosophila melanogaster CG9379-PA
protein.
Length = 720
Score = 105 bits (252), Expect = 4e-23
Identities = 66/164 (40%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Frame = +1
Query: 25 VRHFLIEPTARGVRLRGCPDEPVFSSLSALVYQHXXXXXXXXXXXXXXXXXXWXXXXXXX 204
VRHFLIEPT GV L+GC DEPVF+SLSALV++H
Sbjct: 509 VRHFLIEPTKGGVHLKGCDDEPVFTSLSALVFEHSISQLALPCLLRLPDRDIVPPVRATT 568
Query: 205 XXXXXXXXXXXC-HVLLLGSENTEALTGPAAVKRAVGNILNKKG-PAHV-VHFKVFGGGI 375
+VL L S +TE+LTG A+++A+ + ++ P VHFKV GI
Sbjct: 569 PAQQHLLAHGAATNVLWLYSCDTESLTGNEAIRKAIRQMYGQQPLPQPTEVHFKVSSQGI 628
Query: 376 TLTDAARKLFFRRHYPTNGISYAGIDPDERRYTYVDXGAQSDKR 507
TLTD RK FFR+HY + IS+ IDP+ R +T +SDK+
Sbjct: 629 TLTDNTRKKFFRKHYKADVISHCAIDPENRMWT---SEGESDKK 669
>AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA,
isoform A protein.
Length = 2602
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 60 RQAAGMPRRAGLQLSLRSRLSAYSHAARSA 149
+ A +PR A LQL+LR+ HAAR+A
Sbjct: 1851 QSAVTLPRPAALQLNLRNGKHLALHAARAA 1880
>AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB,
isoform B protein.
Length = 2693
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 60 RQAAGMPRRAGLQLSLRSRLSAYSHAARSA 149
+ A +PR A LQL+LR+ HAAR+A
Sbjct: 1942 QSAVTLPRPAALQLNLRNGKHLALHAARAA 1971
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,195,059
Number of Sequences: 53049
Number of extensions: 442196
Number of successful extensions: 1100
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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