Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_M08
         (512 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80450-10|AAB37834.1|  417|Caenorhabditis elegans Temporarily as...   121   3e-28
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass...   121   3e-28
U80450-8|AAK77616.1|  949|Caenorhabditis elegans Temporarily ass...   121   3e-28
Z54236-5|CAA90980.1|  386|Caenorhabditis elegans Hypothetical pr...    29   2.0  

>U80450-10|AAB37834.1|  417|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 163, isoform b protein.
          Length = 417

 Score =  121 bits (292), Expect = 3e-28
 Identities = 63/153 (41%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
 Frame = +1

Query: 25  VRHFLIEPTARGVRLRGCPDEPVFSSLSALVYQHXXXXXXXXXXXXXXXXXXWXXXXXXX 204
           VRHFLIEP+ +GV+L+GC +EPVF SLSALVYQH                          
Sbjct: 202 VRHFLIEPSPKGVKLKGCNNEPVFGSLSALVYQHSITALALPTKLVLPDFDPAATPEHLS 261

Query: 205 XXXXXXXXXXXCHVLLLGSENTEALTGPAAVKRAVG----NILNKKGPAHVVHFKVFGGG 372
                      C+V+ +GS + E+LTG   VKR++       +N    A  VHFKV   G
Sbjct: 262 ATQALLEQGAACNVVYVGSVDVESLTGNECVKRSIATCSQRAINGDSRAVSVHFKVSSQG 321

Query: 373 ITLTDAARKLFFRRHYPTNGISYAGIDPDERRY 471
           +TLTD  RK+FFRRH+    + +AG+DP ERR+
Sbjct: 322 VTLTDNTRKVFFRRHFNVQSVIFAGMDPIERRF 354


>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 163, isoform a protein.
          Length = 1112

 Score =  121 bits (292), Expect = 3e-28
 Identities = 63/153 (41%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
 Frame = +1

Query: 25   VRHFLIEPTARGVRLRGCPDEPVFSSLSALVYQHXXXXXXXXXXXXXXXXXXWXXXXXXX 204
            VRHFLIEP+ +GV+L+GC +EPVF SLSALVYQH                          
Sbjct: 897  VRHFLIEPSPKGVKLKGCNNEPVFGSLSALVYQHSITALALPTKLVLPDFDPAATPEHLS 956

Query: 205  XXXXXXXXXXXCHVLLLGSENTEALTGPAAVKRAVG----NILNKKGPAHVVHFKVFGGG 372
                       C+V+ +GS + E+LTG   VKR++       +N    A  VHFKV   G
Sbjct: 957  ATQALLEQGAACNVVYVGSVDVESLTGNECVKRSIATCSQRAINGDSRAVSVHFKVSSQG 1016

Query: 373  ITLTDAARKLFFRRHYPTNGISYAGIDPDERRY 471
            +TLTD  RK+FFRRH+    + +AG+DP ERR+
Sbjct: 1017 VTLTDNTRKVFFRRHFNVQSVIFAGMDPIERRF 1049


>U80450-8|AAK77616.1|  949|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 163, isoform c protein.
          Length = 949

 Score =  121 bits (292), Expect = 3e-28
 Identities = 63/153 (41%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
 Frame = +1

Query: 25   VRHFLIEPTARGVRLRGCPDEPVFSSLSALVYQHXXXXXXXXXXXXXXXXXXWXXXXXXX 204
            VRHFLIEP+ +GV+L+GC +EPVF SLSALVYQH                          
Sbjct: 734  VRHFLIEPSPKGVKLKGCNNEPVFGSLSALVYQHSITALALPTKLVLPDFDPAATPEHLS 793

Query: 205  XXXXXXXXXXXCHVLLLGSENTEALTGPAAVKRAVG----NILNKKGPAHVVHFKVFGGG 372
                       C+V+ +GS + E+LTG   VKR++       +N    A  VHFKV   G
Sbjct: 794  ATQALLEQGAACNVVYVGSVDVESLTGNECVKRSIATCSQRAINGDSRAVSVHFKVSSQG 853

Query: 373  ITLTDAARKLFFRRHYPTNGISYAGIDPDERRY 471
            +TLTD  RK+FFRRH+    + +AG+DP ERR+
Sbjct: 854  VTLTDNTRKVFFRRHFNVQSVIFAGMDPIERRF 886


>Z54236-5|CAA90980.1|  386|Caenorhabditis elegans Hypothetical
           protein C27B7.5 protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 104 RELKTGSSGHP-RSLTPRAVGSIRKCRTPPM 15
           RE   G  G+   SLTPR+VGS+R   T PM
Sbjct: 240 RESYYGGYGYSINSLTPRSVGSVRSGFTAPM 270


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,833,379
Number of Sequences: 27780
Number of extensions: 203487
Number of successful extensions: 604
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)