Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_M08
         (512 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.9  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   5.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   7.5  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   7.5  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   7.5  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   9.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -2

Query: 364 RTL*NELHVPDPFCLKYFRRLV*QQQVRSMLQCSLSRVAARDTRRRSTAERA 209
           R L N   V  PF    FR+ V     R +   S+ RV +RD + R+   +A
Sbjct: 80  RVLRNGTLVLLPFPAAAFRQDVHSAAYRCVASNSVGRVLSRDVQVRAVVAQA 131


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -2

Query: 364 RTL*NELHVPDPFCLKYFRRLV*QQQVRSMLQCSLSRVAARDTRRRSTAERA 209
           R L N   V  PF    FR+ V     R +   S+ RV +RD + R+   +A
Sbjct: 80  RVLRNGTLVLLPFPAAAFRQDVHSAAYRCVASNSVGRVLSRDVQVRAVVAQA 131


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 253 VAARDTRRRSTAERAQLRSRSLRTTDPY 170
           V    T  +    RAQ+R    RT DP+
Sbjct: 160 VTPTPTTVQQLLRRAQIRRNERRTPDPH 187


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 123 LIDESGERAEDRLVGASPQPDAARCRLDQEMSYAAN 16
           LID++     + L+  SP+  A   R D+ M + A+
Sbjct: 332 LIDQNAVGCWNSLLPYSPENQAVVARHDEAMIFPAD 367


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 135 RDCMLIDESGER 100
           R CM   ESGER
Sbjct: 73  RSCMCCQESGER 84


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = +1

Query: 244 VLLLGSENTEALTGPA 291
           +L++G+E+T + TGP+
Sbjct: 177 LLIMGNEHTYSETGPS 192


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 5/17 (29%), Positives = 10/17 (58%)
 Frame = +3

Query: 429 WDLVRRHRSRRKTIYVC 479
           WD+++    R +  Y+C
Sbjct: 202 WDIIKVPAVRNEAFYIC 218


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,204
Number of Sequences: 438
Number of extensions: 2874
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)