Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_M03
         (599 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    48   7e-06
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    43   2e-04
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    41   6e-04
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    41   8e-04
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    37   0.013
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    36   0.029
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    33   0.12 
AF047655-10|AAC04396.1|  335|Caenorhabditis elegans Hypothetical...    29   3.3  
U23450-5|AAK31466.3|  706|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z81593-7|CAB63316.2|  400|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z36282-2|CAA85288.3|  240|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
 Frame = +1

Query: 346 CGIQNNDRIVGGSRTELDEYPWMVLVRY-----NKPSGWGFYCGGVLFSSRYVLTAAHC 507
           CG     +I  G + E+DE PW V +       N    W  +C G L S R++LTA HC
Sbjct: 33  CGKNVKSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATHC 91


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 22/70 (31%), Positives = 38/70 (54%)
 Frame = +1

Query: 367 RIVGGSRTELDEYPWMVLVRYNKPSGWGFYCGGVLFSSRYVLTAAHCVKGSDLPPSWKLS 546
           R+VGG  T    +PW   +R NK +    +CG  +    +++TAAHC +  +   S+   
Sbjct: 26  RVVGGFETVPGAFPWTAALR-NKATK-AHHCGASILDKTHLITAAHCFEEDERVSSY--- 80

Query: 547 EVRLGEWNTS 576
           EV +G+W+ +
Sbjct: 81  EVVVGDWDNN 90


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +1

Query: 367 RIVGGSRTELDEYPWMVLVR-YNKPSGWGFYCGGVLFSSRYVLTAAHCVKGSDLPPSWKL 543
           ++  G      E PW V    Y+K       C G + S R++L A HC  G +   SW L
Sbjct: 162 KVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHCFAGQNRDGSWNL 221

Query: 544 SE 549
            E
Sbjct: 222 IE 223


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +1

Query: 367 RIVGGSRTELDEYPWMVLVRYNKPSGWGFY-CGGVLFSSRYVLTAAHCVKGSDLPPSWKL 543
           R++GGS +    +PW V +     S  G + CGG L    +VLTAAHC      P S+  
Sbjct: 57  RLIGGSESSPHSWPWTVQLL----SRLGHHRCGGSLIDPNFVLTAAHCFAKDRRPTSY-- 110

Query: 544 SEVRLGEWNTSS 579
             VR+G   + S
Sbjct: 111 -SVRVGGHRSGS 121


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 406 PWMVLVRYNKPSG-WGFYCGGVLFSSRYVLTAAHC 507
           PW V +R     G +   CGG L + ++VLTAAHC
Sbjct: 44  PWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHC 78


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 35.5 bits (78), Expect = 0.029
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 367 RIVGGSRTELDEYPWMV-LVRYNKPSGWGFYCGGVLFSSRYVLTAAHC 507
           RI+GG+  + D   WM  LV Y   +G G  CG  +    +++TAAHC
Sbjct: 37  RIIGGNSID-DGANWMAKLVSYGD-NGQGILCGATVIDDFWLVTAAHC 82


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 415 VLVRYNKPSGWGFYCGGVLFSSRYVLTAAHCVKGSD 522
           V+ R+  P G    CGGVL +   V+T+AHCV   D
Sbjct: 34  VITRF--PDGTTNVCGGVLIAPSIVITSAHCVFSGD 67


>AF047655-10|AAC04396.1|  335|Caenorhabditis elegans Hypothetical
           protein C17B7.2 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +1

Query: 49  IITCLFLFTFHIAVSQRCNGGANCIALQQCNGLYERLKEGNSPQLTQLLRGLHCGFENPQ 228
           ++  +F+ + H A         NC    +   +  +L + +  QLT  LR L CG ENP+
Sbjct: 6   LLVMVFVGSAHCASQIEKLKSENCTEADKFLEMSCQLFDKSCTQLTACLRTLQCGPENPE 65


>U23450-5|AAK31466.3|  706|Caenorhabditis elegans Hypothetical
           protein C30B5.1 protein.
          Length = 706

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 220 NPQTPKICCPPEFLNGNERFESSSA-YATNSFDPLTLLPSNQV 345
           N   P     P FL  N +F S +  YA NS+ P   + S+QV
Sbjct: 551 NAHPPMFFSDPHFLINNNQFNSPTPFYALNSYFPSFPMDSSQV 593


>Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical
           protein K09E9.1 protein.
          Length = 508

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +1

Query: 448 GFYCGGVLFSSRYVLTAAHCVKGSDLPPSWKLSEVRLGEWNTSSEIDCI 594
           GF+CGG + ++  +LT A      +LP S +L  V L  W+ S  +  +
Sbjct: 179 GFFCGGYMVTNFVILTEAF-----ELPKS-RLLVVSLNGWSVSMAVTAL 221


>Z81593-7|CAB63316.2|  400|Caenorhabditis elegans Hypothetical
           protein T20B3.13 protein.
          Length = 400

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 4   FKKFFTMKILNANKYIITCLFLFTFHIAVSQRCNGGANCI 123
           FKK   + I+N   ++I   FLF F   V    +GG   +
Sbjct: 89  FKKMMLIGIINV--FLILAFFLFMFFFVVQPNVHGGETAV 126


>Z36282-2|CAA85288.3|  240|Caenorhabditis elegans Hypothetical
           protein K10G9.2 protein.
          Length = 240

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = -1

Query: 575 DVFHSPSRTSDNFQLGGRSDPLTQ*AAVSTYLEENRTPPQ*NPHPDGLLYRTNTIQGYSS 396
           D F +   +SD+     RSD       +    EE+  PP   P P  LL+  ++    SS
Sbjct: 160 DAFRNSMASSDSHSSVARSDEYNNGYVLEE--EESAIPPGAPPDPPSLLHSNHSTCSSSS 217

Query: 395 SS 390
           SS
Sbjct: 218 SS 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,645,445
Number of Sequences: 27780
Number of extensions: 330766
Number of successful extensions: 807
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)