Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_M01
         (508 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    47   9e-06
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    47   9e-06
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    44   6e-05
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    44   6e-05
AC006713-4|AAK68404.1|  321|Caenorhabditis elegans Hypothetical ...    27   5.9  

>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 46.8 bits (106), Expect = 9e-06
 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
 Frame = +1

Query: 136 SLKLLKEAYTSGEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITNLLGGAKYISPVNKYS 315
           +LKLL     SG   +VV SPL     L+L   GA   +Q+E+ ++LGG++      ++S
Sbjct: 12  ALKLLATLPHSG---SVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIF---EEFS 65

Query: 316 SLSRQFSGMNPDFFT-MANKMYVGNQYTLNEWFTITARQ-YESEIDTIDFKDTKKAA 480
            L       +    T + N+++V   YT+++ +  T  + Y++  +++DF  T++AA
Sbjct: 66  GLMEAVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAA 122


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 46.8 bits (106), Expect = 9e-06
 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
 Frame = +1

Query: 136 SLKLLKEAYTSGEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITNLLGGAKYISPVNKYS 315
           +LKLL     SG   +VV SPL     L+L   GA   +Q+E+ ++LGG++      ++S
Sbjct: 12  ALKLLATLPHSG---SVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIF---EEFS 65

Query: 316 SLSRQFSGMNPDFFT-MANKMYVGNQYTLNEWFTITARQ-YESEIDTIDFKDTKKAA 480
            L       +    T + N+++V   YT+++ +  T  + Y++  +++DF  T++AA
Sbjct: 66  GLMEAVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAA 122


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
 Frame = +1

Query: 175 DKNVVSSPLGAMFLLSLYREGAGKQSQEEITN-LLGGAKYISPVNKYSSLSRQF-SGMNP 348
           ++++V SPL    +LSL   G    S+++I N LL GA     V  +S +S++  +G   
Sbjct: 21  NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80

Query: 349 DFFTMANKMYVGNQYTLNEWFTITA-RQYESEIDTID 456
               +ANK+Y+   +T+N  F  TA + Y ++  ++D
Sbjct: 81  VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLD 117


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
 Frame = +1

Query: 175 DKNVVSSPLGAMFLLSLYREGAGKQSQEEITN-LLGGAKYISPVNKYSSLSRQF-SGMNP 348
           ++++V SPL    +LSL   G    S+++I N LL GA     V  +S +S++  +G   
Sbjct: 21  NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80

Query: 349 DFFTMANKMYVGNQYTLNEWFTITA-RQYESEIDTID 456
               +ANK+Y+   +T+N  F  TA + Y ++  ++D
Sbjct: 81  VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLD 117


>AC006713-4|AAK68404.1|  321|Caenorhabditis elegans Hypothetical
           protein Y119D3A.1 protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 25/74 (33%), Positives = 35/74 (47%)
 Frame = +1

Query: 37  IYFSVTVVCSVQAFHIFGRDYERTALGDAIDKASLKLLKEAYTSGEDKNVVSSPLGAMFL 216
           IY   T VC V++   F  +Y +TAL D I   +     E Y S  +K   S+ LGA   
Sbjct: 77  IYDEYTGVCRVRSTKTFEGNYLQTALND-IKMIAKNNATELYFSSLEK---SNKLGA--- 129

Query: 217 LSLYREGAGKQSQE 258
            SLY +     ++E
Sbjct: 130 -SLYEDSENAGAEE 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,734,540
Number of Sequences: 27780
Number of extensions: 287209
Number of successful extensions: 722
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)