Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_L24
(533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human nie... 31 0.69
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 28 4.8
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 28 4.8
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 4.8
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 28 4.8
>L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 2 protein.
Length = 1274
Score = 30.7 bits (66), Expect = 0.69
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 34 VGIEPAIYTESGRTTRCAIIASNKYIQGKWNLFEEP*P 147
V ++ Y G+ CAI++ Y Q KW FE P
Sbjct: 429 VKLDDICYKPIGKNHGCAIMSPTNYFQNKWTNFENAGP 466
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 1686 KRKWSTKTKAGNWAPKFN 1703
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 2025 KRKWSTKTKAGNWAPKFN 2042
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 1345 KRKWSTKTKAGNWAPKFN 1362
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 1683 KRKWSTKTKAGNWAPKFN 1700
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 1686 KRKWSTKTKAGNWAPKFN 1703
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 2025 KRKWSTKTKAGNWAPKFN 2042
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 1683 KRKWSTKTKAGNWAPKFN 1700
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 1686 KRKWSTKTKAGNWAPKFN 1703
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 2025 KRKWSTKTKAGNWAPKFN 2042
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 1345 KRKWSTKTKAGNWAPKFN 1362
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 1683 KRKWSTKTKAGNWAPKFN 1700
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 265 KSKWINKMKKGRWNPKIN 212
K KW K K G W PK N
Sbjct: 1685 KRKWSTKTKAGNWAPKFN 1702
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,871,690
Number of Sequences: 27780
Number of extensions: 238415
Number of successful extensions: 572
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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