Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_L21
(451 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82096-7|CAB05033.2| 332|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical pr... 29 1.6
AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine re... 28 2.7
Z82060-4|CAB04885.2| 434|Caenorhabditis elegans Hypothetical pr... 27 6.3
AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical ... 27 6.3
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 27 6.3
Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical p... 27 8.3
Z66519-6|CAA91374.3| 394|Caenorhabditis elegans Hypothetical pr... 27 8.3
L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-lik... 27 8.3
L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-lik... 27 8.3
>Z82096-7|CAB05033.2| 332|Caenorhabditis elegans Hypothetical
protein ZK909.5 protein.
Length = 332
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 18 YSAKDYDTFYKTTVYMKDRVNQDLYIYVLST 110
YS Y +K+ +Y K+R NQ+ YI V+ +
Sbjct: 69 YSETQYWYTFKSDIYRKERTNQEGYIEVMKS 99
>Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical
protein F36G9.5 protein.
Length = 327
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 147 IPPIYEVLPEYFNNGEILHTAQRIGVHGSRMIEYYPSTYKWDNSVVIRSNTTVWHYHC 320
I PI + + NG H A I +GS M+ + + W N+ ++ NT +W C
Sbjct: 163 IYPILCIAIMFPGNGFCSHVAYPI--YGSIMLRVTDTMFGWTNNYILMFNTFLWVSIC 218
>AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine
receptor, class t protein70 protein.
Length = 323
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 284 Y*VEYYCLALPLPKRFYVLLLT 349
Y V Y+C+ALPL F+VL+ T
Sbjct: 15 YGVAYFCIALPLFPVFFVLMKT 36
>Z82060-4|CAB04885.2| 434|Caenorhabditis elegans Hypothetical
protein T27F6.6 protein.
Length = 434
Score = 27.1 bits (57), Expect = 6.3
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Frame = +3
Query: 105 STLHIHRSDLEG-YAIPPIYEV--LPEYFNNGEILHTAQRIGVHGSRMIEYYPSTYKWDN 275
ST +HR + G Y I +Y++ L E ++ + + ++++ YP + + +
Sbjct: 57 STDRVHRLNKIGQYMIDELYDIVGLQELWSYYDFVRLSEQVS-------SVYPY-FHYFH 108
Query: 276 SVVIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVVPL 428
S S V+ H +S + YSLN + HH+ W GG VV L
Sbjct: 109 SGFTGSGVCVFSRH---PIVSTLTNRYSLNG--FAHHIHRGDWFGGKVVGL 154
>AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical
protein Y47H9C.1 protein.
Length = 377
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 9 NVLYSAKDYDTFYKTTVYMKDRVNQDLYIYVLSTLHIHRSDLEGYAI-PPIY 161
N+ SA+ DT + +VY+ N + ++ + +++GY + PP Y
Sbjct: 42 NIYISAQSDDTSFLASVYIVTAKNSKSLLNIMQDNLQNTGEIQGYPVDPPAY 93
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 186 NGEILHTAQRIGVHGSRMIEYYPSTYKWDNSVVIRSNTTVWHYHCQSASMSYYLHDYSL 362
+G + + V+G +IEY P+ K + + V + + AS+ +YL+D L
Sbjct: 531 SGSNVKATANVQVNGDSLIEYGPADQKSLIGTNVEFSCEVAKEYVRKASVEWYLNDVLL 589
>Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 26.6 bits (56), Expect = 8.3
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 246 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 422
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 423 PLL 431
++
Sbjct: 287 KII 289
>Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 26.6 bits (56), Expect = 8.3
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 246 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 422
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 423 PLL 431
++
Sbjct: 287 KII 289
>Z66519-6|CAA91374.3| 394|Caenorhabditis elegans Hypothetical
protein B0334.6 protein.
Length = 394
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 12 VLYSAKDYDTFYKTTVYMKDRVNQDLYIYVLSTLHIHR 125
VLY TFYK++V + N + Y+ V+ L+ HR
Sbjct: 122 VLYIRTLASTFYKSSVLIVVAFNIERYLCVVCPLNSHR 159
>L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 26.6 bits (56), Expect = 8.3
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 246 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 422
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 423 PLL 431
++
Sbjct: 287 KII 289
>L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 26.6 bits (56), Expect = 8.3
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 246 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 422
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 423 PLL 431
++
Sbjct: 287 KII 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,751,675
Number of Sequences: 27780
Number of extensions: 227849
Number of successful extensions: 578
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -