Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_L20
(452 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 85 5e-18
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 43 3e-05
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 42 6e-05
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 39 3e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 38 0.001
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 36 0.002
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 36 0.004
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 31 0.11
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 30 0.14
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 30 0.14
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 29 0.25
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 29 0.33
SPAC24C9.09 |||mitochondrial threonine-tRNA ligase|Schizosacchar... 28 0.58
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.0
SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar... 27 1.8
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 27 1.8
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 2.3
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 26 3.1
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 26 3.1
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 26 3.1
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 4.1
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 25 4.1
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 25 5.4
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 25 5.4
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 25 5.4
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 25 7.2
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.2
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 24 9.5
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 85.0 bits (201), Expect = 5e-18
Identities = 42/98 (42%), Positives = 60/98 (61%)
Frame = +2
Query: 5 MLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 184
+L P + S+ + VTT +G+ SYP DT+RRRMMM SG A + Y ++ C
Sbjct: 223 VLVGPLEGNFLASFLLGWAVTTGSGVASYPLDTIRRRMMMTSGEA---VKYSSSFECGRQ 279
Query: 185 IAKTEGGAAFFKGAFSNVLRGTGGAFVLVLYDEIKKLL 298
I EG +FFKGA +N+LRG GA VL +YD+++ L+
Sbjct: 280 ILAKEGARSFFKGAGANILRGVAGAGVLSIYDQVQLLM 317
Score = 26.6 bits (56), Expect = 1.8
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +2
Query: 8 LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDIL---YKNTIHCW 178
+ + KN+ + + V+ + P + V+ + Q ++ L YK C+
Sbjct: 19 ITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECF 78
Query: 179 ATIAKTEGGAAFFKGAFSNVLR 244
A EG + ++G +NVLR
Sbjct: 79 KRTAAEEGVISLWRGNTANVLR 100
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 42.7 bits (96), Expect = 3e-05
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +2
Query: 8 LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATI 187
LP + V ++ + + + P DTV+ RM QS A + YKN+IHC I
Sbjct: 195 LPPDEKLSTVTTFLVGSVAGIITVYCTQPIDTVKSRM--QSLSASKE--YKNSIHCAYKI 250
Query: 188 AKTEGGAAFFKGAFSNVLR-GTGGAFVLVLYDEIKKLL 298
+G F+ GA + R G V +Y+++ ++L
Sbjct: 251 LTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEIL 288
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 41.5 bits (93), Expect = 6e-05
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +2
Query: 50 IAQTVTTVAG-IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGA 226
IA T+ + G +S PFD ++ R+ A Y T+A+ EG A +KG
Sbjct: 204 IAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGF 263
Query: 227 FSNVLR-GTGGAFVLVLYDEI 286
VLR G GG +LV+++ +
Sbjct: 264 VPKVLRLGPGGGILLVVFNSV 284
Score = 37.9 bits (84), Expect = 7e-04
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 23 NTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 199
N P +++A A V ++ +++ YP D V+ RM + G KSD Y T C I K E
Sbjct: 5 NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNE 59
Query: 200 GGAAFFKGAFSNVL 241
G ++G +L
Sbjct: 60 GPHRLYRGILPPIL 73
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 39.1 bits (87), Expect = 3e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 80 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKG 223
++ PFD V+ R+ QS + +Y N + C I+K EG AAF+KG
Sbjct: 33 LVGQPFDCVKVRLQSQSNVSP---IYNNALDCVKKISKNEGLAAFYKG 77
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 37.5 bits (83), Expect = 0.001
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +2
Query: 8 LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR--AKSDILYKNTIHCWA 181
L DPK + I+ A + PF V+ RM S + YK+ + ++
Sbjct: 120 LDDPKGNKLAINVASGAGSGLCGALFGSPFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFS 179
Query: 182 TIAKTEGGAAFFKGAFSNVLRGTGGAFV-LVLYDEIKKLL 298
I K G F GA + +LR G+ V L +Y+ K+++
Sbjct: 180 RIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMI 219
Score = 33.9 bits (74), Expect = 0.012
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 95 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVLR-GTGGAFVLV 271
FDTV RM Q K+ LYKN I C ++EG A +KG +++ R F L
Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLARIAPHTIFCLT 305
Query: 272 LYDEIKKL 295
++ KL
Sbjct: 306 FVEQTNKL 313
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 36.3 bits (80), Expect = 0.002
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 68 TVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFF 217
T++ PFD +++RM + S + YK+ +HC T+ + EG AF+
Sbjct: 125 TISDAFMTPFDVIKQRMQLPSRK------YKSALHCATTVFRNEGLGAFY 168
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 35.5 bits (78), Expect = 0.004
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = +2
Query: 11 PDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIA 190
P P + A + I +P + +R R+ Q G + Y I C+
Sbjct: 328 PQDVKLPNGLVMAFGALSGSTGATIVFPLNVIRTRLQTQ-GTSAHPATYDGFIDCFYKTT 386
Query: 191 KTEGGAAFFKGAFSNVLR-GTGGAFVLVLYDEIKKLL 298
K EG +KG N+L+ A ++Y+ KK L
Sbjct: 387 KNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKKWL 423
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 30.7 bits (66), Expect = 0.11
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +2
Query: 2 GMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWA 181
G +P +N V+S I+ T I+ PFD ++ R+ ++ +YKN +H
Sbjct: 204 GTVPH-RNIVNVMSGLISGATATA---ITNPFDMLKTRVQLEPH------IYKNFLHSAK 253
Query: 182 TIAKTEGGAAFFKGAFSNVLR 244
+ EG F G F VLR
Sbjct: 254 LVYANEGFRGFLDGFFLRVLR 274
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 30.3 bits (65), Expect = 0.14
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 83 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVLR 244
+++P D +RRR + YKN I KTEG FF+G SN+L+
Sbjct: 243 LTFPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 30.3 bits (65), Expect = 0.14
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 155 YKNTIHCWATIAKTEGGAAFFKGAFSNVLRGTGGAFVLVLYDEIKKLL 298
Y NT + I K EG AAF++G F ++ LY+ K L
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL 277
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 29.5 bits (63), Expect = 0.25
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +2
Query: 23 NTPIVISWAIAQTVTTV-AGIISYPFDTVRRRMMMQ----SGRAKSDILYKNTIHCWATI 187
N P + + +A V + A ++ P + ++ R+ +Q + +S+ Y + I
Sbjct: 106 NLPETLCFLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQI 165
Query: 188 AKTEGGAAFFKGAFSNVLRGTG-GAFVLVLYDEIKKL 295
AK EG FF G + +LR F L+ Y++++++
Sbjct: 166 AKQEGMKTFFYGYRATILRDIPFSGFQLLFYEKLRQV 202
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 29.1 bits (62), Expect = 0.33
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 47 AIAQTVTTVAGIISYPFDTVRRRMMM--QSGRAKSDILYKNTIHCWATIAKTEGGAAFFK 220
AIA +T+ A + P V+ R+ + +SG+A Y+++I C + EG +K
Sbjct: 170 AIAGVITSAA---TNPIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYK 223
Query: 221 GAFSNVLRGTGGAFVLVLYDEIK 289
G +++L VLY++ K
Sbjct: 224 GLSASLLGVGESTLQWVLYEKFK 246
>SPAC24C9.09 |||mitochondrial threonine-tRNA
ligase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 473
Score = 28.3 bits (60), Expect = 0.58
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 256 TAGTSEHVREGALEEGGSTLSLGNGRPAVYGVLVENVALGTAGLHHHTPTNRVEW 92
T +E+ AL+E G T + G A YG ++ + G H T T ++++
Sbjct: 245 TWNEAENGLREALQESGETWIINEGDGAFYGPKIDVMVADARGKWHQTATIQLDF 299
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 1.0
Identities = 27/112 (24%), Positives = 40/112 (35%)
Frame = +3
Query: 15 TRRTPPSSSAGPSRKPSPQSPVSSRIHSTRFVGV**CSPAVPRATFSTRTPYTAGRPLPR 194
T PP+S++ S P P S S+ S+ + T ST P T P
Sbjct: 356 TPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLS------TSTSCTTSTSIPPTGNSTTPV 409
Query: 195 LRVEPPSSRAPSRTCSEVPAVRSCWYCTMKSRSSSKSNVRIVTIINSIVIPY 350
PP+S + T + S Y + S+ + T S +PY
Sbjct: 410 TPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTT---STSVPY 458
Score = 25.0 bits (52), Expect = 5.4
Identities = 20/74 (27%), Positives = 28/74 (37%)
Frame = +3
Query: 15 TRRTPPSSSAGPSRKPSPQSPVSSRIHSTRFVGV**CSPAVPRATFSTRTPYTAGRPLPR 194
T PP+S++ S P P S S+ S+ T ST P T P
Sbjct: 302 TPTVPPTSTSSTSTPPPPASTSSTGTSSSPL------PSTSTSCTTSTSIPPTGNSTTPV 355
Query: 195 LRVEPPSSRAPSRT 236
PP+S + + T
Sbjct: 356 TPTVPPTSTSSTST 369
>SPAC1786.01c ||SPAC31G5.20c|triacylglycerol
lipase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 26.6 bits (56), Expect = 1.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 243 EVPAVRSCWYCTMKSRSSSKSNVRIVTIINSIVIPYHLNHSPEIMYY 383
E+ ++C Y T S + +++ R I+N VIP ++ P+++ Y
Sbjct: 336 EILWAKTCMYFTRGSLTFAEAYKRTGRILNISVIPSDVHSPPKLINY 382
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 26.6 bits (56), Expect = 1.8
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 201 VEPPSSRAPSRTCSEVPAVRSCWYCTMKSRSSSKSNVRIVTIINSIV 341
++ P+S+ P+R SE P+ + KSR SK R+ I+ +I+
Sbjct: 20 IDLPNSKKPTRALSEQPSASETQSVSNKSR-KSKFGKRLNFILGAIL 65
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 2.3
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +3
Query: 12 PTRRTPPSSSAGPSRKPSPQSPVSSRIHSTRFVGV**CSPAVPRATFSTRTPYTAGRP-- 185
P+ PP++ P +PQ P + + V P VP A + P P
Sbjct: 527 PSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEV 586
Query: 186 --LPRLRVEPPSSRAPS 230
+P+ V P APS
Sbjct: 587 PSVPQPPVAPVVPEAPS 603
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 25.8 bits (54), Expect = 3.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 126 SPAVPRATFSTRTPYTAGRPLPRLRVEPPSSRAPSRT 236
+P R ++S R+ Y + P P V+ SR+P R+
Sbjct: 112 TPRHHRRSYSPRSDYGSRSPSPHSSVDSHQSRSPVRS 148
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 3.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 2 GMLPDPKNTPIVISWAIAQTVTTV 73
GMLPDPK+ P++ +T V
Sbjct: 89 GMLPDPKSIPVISQALTKYKITDV 112
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 25.8 bits (54), Expect = 3.1
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 83 ISYPFDTVRRRMMMQSGRA-KSDILYKNTIHCWATIAKTEGGAAFFKG 223
+SYPF+ RR+M + R KS + K + T K G FF G
Sbjct: 253 VSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQ---TTYKEAGMRGFFVG 297
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 4.1
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 7/85 (8%)
Frame = +3
Query: 12 PTRRTPPSSSAGPSRKPS-------PQSPVSSRIHSTRFVGV**CSPAVPRATFSTRTPY 170
P+R TP S + P +PS P PV + S S T+ + Y
Sbjct: 115 PSRGTP-SLPSRPGSRPSVLNQEQVPPPPVRPNVMSQMPPPPSYSSSGSYSQTYQSNANY 173
Query: 171 TAGRPLPRLRVEPPSSRAPSRTCSE 245
TA PLP P P R S+
Sbjct: 174 TASSPLPTASANAPLPVPPPRRVSQ 198
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 25.4 bits (53), Expect = 4.1
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +3
Query: 3 ACCPTRRTPPSSSAGPSRKPSPQSPVSS---RIHSTRFVGV**CSPAVPRATFSTRTPYT 173
+C P P S + P+R PSP SS R S V +P P +S ++ +
Sbjct: 205 SCSPEPYLPLSPTRSPARTPSPIRLYSSDALRPQSPLSPSVEYLTPPNP---YSLKSDIS 261
Query: 174 AGRPLPRLRVEPPSS 218
+ R LP++ V+ +S
Sbjct: 262 STRQLPKIPVQDYAS 276
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 25.0 bits (52), Expect = 5.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 282 SSYNTNTNAPPVPLSTFEKAPLKKAAP 202
S+Y+ N+ VP+ TF K L+K P
Sbjct: 845 STYSKKLNSYVVPMETFVKYALEKLRP 871
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 25.0 bits (52), Expect = 5.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 250 GTSEHVREGALEEGGSTLSLGNGRPAV 170
G H AL+ GG+ + GNG+P +
Sbjct: 258 GICIHTAVLALKRGGTFVQAGNGKPVI 284
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.0 bits (52), Expect = 5.4
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 51 SRKPSPQSPVSSRIHSTR 104
SRKP P SP +R HS R
Sbjct: 84 SRKPLPASPSRTRDHSLR 101
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 24.6 bits (51), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 182 TIAKTEGGAAFFKGAFSNVLRGTGGAFVLVLYDE 283
TIAK EG A + A +N L+ AFV V ++E
Sbjct: 875 TIAKEEGMAKAREEAIANPLKYAIDAFVAVDHEE 908
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 24.6 bits (51), Expect = 7.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 279 SYNTNTNAPPVPLSTFEKAPLKKAAPP 199
S N NT PP S F P APP
Sbjct: 100 SSNYNTAKPPYQTSQFYARPQSSYAPP 126
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 24.2 bits (50), Expect = 9.5
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 297 SKSNVRIVT--IINSIVIPYHLNHSPEIMYY*LDAKMTLVTYF 419
S N+ +V+ I+++I++ Y LN+ PE + +D + L T F
Sbjct: 518 SSGNILVVSHRIVSNILMTYFLNYHPEDI---IDVGLPLHTLF 557
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,798,638
Number of Sequences: 5004
Number of extensions: 35061
Number of successful extensions: 163
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 168258430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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