Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_L18
         (494 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              28   0.047
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.33 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   1.8  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    21   7.2  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 28.3 bits (60), Expect = 0.047
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 410 CTREKDPVCGSDGVTYSNLCLLKCAS 333
           C R   PVC S+G  Y+N C L  A+
Sbjct: 110 CPRRHRPVCASNGKIYANHCELHRAA 135


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 25.4 bits (53), Expect = 0.33
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 394 SFSRVHIHGCKLASLAPLAFAIMFHLQR 477
           S   +H+HGCK+  +   AF  +  L++
Sbjct: 93  SLHELHVHGCKVLRIPEGAFQPLLELKK 120


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -1

Query: 263 N*NHSNKYIVTDAN*RENV*NNKYSVFNVEFQL 165
           N    N+Y++  ++  +NV NN  ++ +V FQ+
Sbjct: 368 NNTQRNEYLLALSDRNQNVLNNDLNLEHVNFQI 400


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 248 SNGFSFPPPTLCYYR 292
           ++G+ F PP   +YR
Sbjct: 69  ASGYGFVPPNQAFYR 83


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 194 YSVFNVEFQLYFR 156
           YS+FN EF+  F+
Sbjct: 325 YSIFNTEFREAFK 337


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 216 PSVRICDNILVRMVLVSHR 272
           P + +  NI V+ VLV HR
Sbjct: 656 PLLLVLSNIHVKEVLVHHR 674


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 216 PSVRICDNILVRMVLVSHR 272
           P + +  NI V+ VLV HR
Sbjct: 656 PLLLVLSNIHVKEVLVHHR 674


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,411
Number of Sequences: 438
Number of extensions: 2937
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)