Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_L17
(491 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0963 - 12769715-12769859,12770639-12770889 64 6e-11
07_03_1662 + 28447419-28447666,28448429-28448573 62 3e-10
06_03_0608 + 22705321-22705652,22705809-22706178,22706264-227066... 29 1.5
01_05_0783 + 25183361-25185628 29 2.0
01_02_0106 - 11175200-11175385,11175463-11175496,11175987-111762... 29 2.0
01_03_0093 - 12422558-12422607,12422679-12422935,12423565-124239... 29 2.7
11_01_0639 - 5128139-5128159,5128237-5128329,5128431-5128491,512... 28 3.5
10_06_0052 + 10106778-10107017,10107420-10107969,10108134-101083... 28 3.5
05_03_0070 - 8023343-8023528,8023606-8023639,8024013-8024058,802... 28 3.5
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 28 3.5
03_05_0594 + 25981587-25981826,25981912-25982160,25982257-259838... 28 3.5
03_05_0190 - 21770610-21770641,21770741-21770811,21771058-217711... 28 3.5
02_03_0365 - 18198669-18198809,18198887-18198979,18199078-181991... 28 3.5
12_01_0633 - 5241098-5241283,5241361-5241453,5241555-5241615,524... 28 4.7
11_04_0403 + 17298498-17298713,17298799-17299696,17299874-173005... 28 4.7
04_04_1004 + 30035704-30035934,30036030-30036287,30036382-300364... 27 6.2
02_02_0223 - 8021040-8021247,8022275-8022367,8022808-8023059,802... 27 6.2
10_02_0126 - 5543658-5543670,5543748-5543840,5544344-5544529,554... 27 8.2
02_03_0336 - 17888959-17889315 27 8.2
>03_02_0963 - 12769715-12769859,12770639-12770889
Length = 131
Score = 64.1 bits (149), Expect = 6e-11
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEG-KTNNLGNHVVIARDKTKVAINADIPFSKRY 319
V D +++ + EK+L+ER+KV G K NLG V ++RDKTKV + +D PFSKRY
Sbjct: 32 VDDKIMEIASLEKFLQERIKVAGGKAGNLGESVTVSRDKTKVTVTSDGPFSKRY 85
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSAHDS--YELRYFNI 429
K+YLKK+++R ++ S D YELRYFNI
Sbjct: 91 KKYLKKHNVRDW-LRVIASNKDRNVYELRYFNI 122
>07_03_1662 + 28447419-28447666,28448429-28448573
Length = 130
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEG-KTNNLGNHVVIARDKTKVAINADIPFSKRY 319
V+D +++ + EK+L+ER+KV G K NLG+ V + RDKTKV + +D FSKRY
Sbjct: 31 VEDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVTRDKTKVTVTSDGAFSKRY 84
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSA-HDSYELRYFNI 429
K+YLKK+++R + + + YELRYFNI
Sbjct: 90 KKYLKKHNVRDWLRVIAANKDRNVYELRYFNI 121
>06_03_0608 +
22705321-22705652,22705809-22706178,22706264-22706656,
22707183-22707204,22707257-22707928,22708019-22708494
Length = 754
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +2
Query: 224 EGKTNNLGNHVVIARDKTKVAINADIPFSKRYSQIPDPSVTSRKTIFGELAPNWWFLHMT 403
+GK + +G +VI TK+A +A SK+ +++ D S I A + +
Sbjct: 332 KGKKSKIGTALVIQEQITKIAESASSFTSKKSNEVTDSESESGAQIAQVYADMYLHKNPP 391
Query: 404 HMSFATSTSMLIATMKT 454
S + L+ T++T
Sbjct: 392 RTSILSGMGWLLETLRT 408
>01_05_0783 + 25183361-25185628
Length = 755
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 314 RYSQIPDPSVTSRKTIFGELAPNWWFLHMTHMSFATSTSMLIATMKTTRIKL 469
R SQ P V +R P+WWF M +S A S+L+ T+ + ++L
Sbjct: 409 RASQRDKPDVHTRLMKSYRDVPSWWFYAMLALSMA--VSLLLCTVLRSAVQL 458
>01_02_0106 -
11175200-11175385,11175463-11175496,11175987-11176247,
11176501-11176831,11176899-11177589,11177611-11178156,
11178441-11178680
Length = 762
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W +R
Sbjct: 180 EEMRKKRQPVPMEEWIQRSRNWVRAR 205
>01_03_0093 -
12422558-12422607,12422679-12422935,12423565-12423932,
12423939-12424800,12425247-12425464
Length = 584
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W +R
Sbjct: 167 EEMRKKGQPVPMEEWTQRSRNWARAR 192
>11_01_0639 -
5128139-5128159,5128237-5128329,5128431-5128491,
5128579-5128689,5128770-5129021,5129105-5129440,
5129486-5131140,5131316-5131555
Length = 922
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W +R
Sbjct: 265 EEMRKKGQPVPMEEWTQRSRNWVRAR 290
>10_06_0052 +
10106778-10107017,10107420-10107969,10108134-10108358,
10108552-10108865,10108880-10109214,10109298-10109549,
10109630-10109740,10109828-10109888,10110038-10110130,
10110208-10110264
Length = 745
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W +R
Sbjct: 179 EEMRKKGQPVLMEEWTQRSKNWVRAR 204
>05_03_0070 -
8023343-8023528,8023606-8023639,8024013-8024058,
8024139-8024389,8024473-8026001,8026128-8026496,
8026582-8026821
Length = 884
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W +R
Sbjct: 253 EEMRKKGQPVPMEEWKQRSRNWVRAR 278
>03_05_0791 +
27736978-27737217,27737648-27739191,27739512-27739763,
27739844-27739954,27740042-27740102,27740373-27740558
Length = 797
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W +R
Sbjct: 180 EEMRKKGQPVPMEEWTQRSRNWVRAR 205
>03_05_0594 +
25981587-25981826,25981912-25982160,25982257-25983818,
25984139-25984390,25984471-25984581,25984669-25984729,
25984829-25984921,25984999-25985184
Length = 917
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W +R
Sbjct: 263 EEMRKKGQPVPMEEWTQRSRNWVRAR 288
>03_05_0190 -
21770610-21770641,21770741-21770811,21771058-21771168,
21771249-21771500,21771584-21772086,21772188-21773234,
21773361-21773768,21773814-21773956,21774020-21774053
Length = 866
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W +R
Sbjct: 245 EEMRKKGQPVPMEEWTQRSRNWVRAR 270
>02_03_0365 -
18198669-18198809,18198887-18198979,18199078-18199138,
18199291-18199336,18199417-18199682,18199766-18200744,
18201012-18201564,18201661-18201909,18201995-18202234
Length = 875
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W +R
Sbjct: 263 EEMRKKGQPVPMEEWTQRSRNWVRAR 288
>12_01_0633 -
5241098-5241283,5241361-5241453,5241555-5241615,
5241703-5241813,5241960-5242145,5242229-5242590,
5242730-5243152,5243159-5244382,5244468-5244707
Length = 961
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W R
Sbjct: 295 EEMRKKGQPVPMEEWTQRSRNWVRGR 320
>11_04_0403 +
17298498-17298713,17298799-17299696,17299874-17300592,
17301714-17301806,17301884-17302051
Length = 697
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W +R
Sbjct: 287 EEMRKKGQPVPIEEWTQRSRNWVRAR 312
>04_04_1004 +
30035704-30035934,30036030-30036287,30036382-30036479,
30036574-30037137,30037232-30037484,30037576-30037758,
30037839-30038465
Length = 737
Score = 27.5 bits (58), Expect = 6.2
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 158 LVKDSF-LDVGTFEKYLKERVKVEGKTNNLGNHVVIARDKTKVAINADIPFSKRYSQIP- 331
+V D F LD + + K + + T+ IA + V + +R+ Q
Sbjct: 336 IVNDRFELDTDAYARQGKIHLSLFFATSYGLGFATIAATLSHVTLFYGTEMYRRFRQAAR 395
Query: 332 -DPSVTSRKTIFGELAPNWWFLHMTHMSFATSTSMLIATMKTTRIKL 469
+P V +R + PNWWF M ++ A ++L+ T+ ++L
Sbjct: 396 ENPDVHTRLMRRYDDIPNWWFYGM--LALAMVAALLLCTVFKDEVQL 440
>02_02_0223 -
8021040-8021247,8022275-8022367,8022808-8023059,
8023143-8023597,8023667-8023983,8024019-8024298,
8024423-8024728,8024762-8025130,8025216-8025455
Length = 839
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W R
Sbjct: 284 EEMRKKGQPVPMEEWTQRSRNWDKLR 309
>10_02_0126 -
5543658-5543670,5543748-5543840,5544344-5544529,
5544613-5545310,5545323-5546237,5546842-5547081
Length = 714
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KEARRKERPVTPEDW*ERS*KWPNSR 103
+E R+K +PV E+W +RS W +R
Sbjct: 122 EEMRKKGQPVPMEEWTQRSGNWVIAR 147
>02_03_0336 - 17888959-17889315
Length = 118
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 89 WPNSRQRLQEED*AFNLTFNGHTLVKDSFLDVGTFEKYLK 208
W RQ +E+ A ++ G V DSF +VG++ +L+
Sbjct: 63 WGERRQHSLQEEVAAFASYRGDGGVWDSFYEVGSWMNFLR 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,431,774
Number of Sequences: 37544
Number of extensions: 240828
Number of successful extensions: 644
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -