Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_L17
(491 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59357-1|CAA42007.1| 128|Homo sapiens Epstein-Barr virus small ... 64 3e-10
D17652-1|BAA04545.1| 128|Homo sapiens HBp15/L22 protein. 64 3e-10
CR456873-1|CAG33154.1| 128|Homo sapiens RPL22 protein. 64 3e-10
BC066314-1|AAH66314.1| 128|Homo sapiens ribosomal protein L22 p... 64 3e-10
BC058887-1|AAH58887.1| 128|Homo sapiens ribosomal protein L22 p... 64 3e-10
BC035566-1|AAH35566.1| 128|Homo sapiens ribosomal protein L22 p... 64 3e-10
AL031847-9|CAI19448.1| 128|Homo sapiens ribosomal protein L22 p... 64 3e-10
AF136171-1|AAP97261.1| 128|Homo sapiens heparin-binding protein... 64 3e-10
BC107708-1|AAI07709.1| 122|Homo sapiens RPL22L1 protein protein. 61 2e-09
BC062731-1|AAH62731.1| 132|Homo sapiens RPL22L1 protein protein. 61 2e-09
BC132701-1|AAI32702.1| 232|Homo sapiens chromosome 9 open readi... 32 1.2
BC132699-1|AAI32700.1| 232|Homo sapiens chromosome 9 open readi... 32 1.2
AK092588-1|BAC03921.1| 232|Homo sapiens protein ( Homo sapiens ... 32 1.2
BC151219-1|AAI51220.1| 581|Homo sapiens matrilin 4 protein. 29 8.8
BC141811-1|AAI41812.1| 540|Homo sapiens matrilin 4 protein. 29 8.8
BC131763-1|AAI31764.1| 581|Homo sapiens matrilin 4 protein. 29 8.8
AL021578-3|CAB46380.1| 622|Homo sapiens matrilin 4 protein. 29 8.8
AL021578-2|CAB39280.1| 581|Homo sapiens matrilin 4 protein. 29 8.8
AL021578-1|CAI21077.1| 432|Homo sapiens matrilin 4 protein. 29 8.8
AK074597-1|BAC11083.1| 540|Homo sapiens protein ( Homo sapiens ... 29 8.8
AK074595-1|BAC11081.1| 488|Homo sapiens protein ( Homo sapiens ... 29 8.8
AJ007581-1|CAA07569.1| 581|Homo sapiens matrilin-4 protein. 29 8.8
>X59357-1|CAA42007.1| 128|Homo sapiens Epstein-Barr virus small RNA
associated protein protein.
Length = 128
Score = 63.7 bits (148), Expect = 3e-10
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEGKTNNLGNHVV-IARDKTKVAINADIPFSKRY 319
V+D +D FE++L+ER+KV GK NLG VV I R K+K+ + +++PFSKRY
Sbjct: 29 VEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRY 82
Score = 37.9 bits (84), Expect = 0.019
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSAHDSYELRYFNIN 432
K+YLKKN+LR +V ++ +SYELRYF IN
Sbjct: 88 KKYLKKNNLRDW-LRVVANSKESYELRYFQIN 118
>D17652-1|BAA04545.1| 128|Homo sapiens HBp15/L22 protein.
Length = 128
Score = 63.7 bits (148), Expect = 3e-10
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEGKTNNLGNHVV-IARDKTKVAINADIPFSKRY 319
V+D +D FE++L+ER+KV GK NLG VV I R K+K+ + +++PFSKRY
Sbjct: 29 VEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRY 82
Score = 37.9 bits (84), Expect = 0.019
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSAHDSYELRYFNIN 432
K+YLKKN+LR +V ++ +SYELRYF IN
Sbjct: 88 KKYLKKNNLRDW-LRVVANSKESYELRYFQIN 118
>CR456873-1|CAG33154.1| 128|Homo sapiens RPL22 protein.
Length = 128
Score = 63.7 bits (148), Expect = 3e-10
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEGKTNNLGNHVV-IARDKTKVAINADIPFSKRY 319
V+D +D FE++L+ER+KV GK NLG VV I R K+K+ + +++PFSKRY
Sbjct: 29 VEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRY 82
Score = 37.9 bits (84), Expect = 0.019
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSAHDSYELRYFNIN 432
K+YLKKN+LR +V ++ +SYELRYF IN
Sbjct: 88 KKYLKKNNLRDW-LRVVANSKESYELRYFQIN 118
>BC066314-1|AAH66314.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 63.7 bits (148), Expect = 3e-10
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEGKTNNLGNHVV-IARDKTKVAINADIPFSKRY 319
V+D +D FE++L+ER+KV GK NLG VV I R K+K+ + +++PFSKRY
Sbjct: 29 VEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRY 82
Score = 37.9 bits (84), Expect = 0.019
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSAHDSYELRYFNIN 432
K+YLKKN+LR +V ++ +SYELRYF IN
Sbjct: 88 KKYLKKNNLRDW-LRVVANSKESYELRYFQIN 118
>BC058887-1|AAH58887.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 63.7 bits (148), Expect = 3e-10
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEGKTNNLGNHVV-IARDKTKVAINADIPFSKRY 319
V+D +D FE++L+ER+KV GK NLG VV I R K+K+ + +++PFSKRY
Sbjct: 29 VEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRY 82
Score = 37.9 bits (84), Expect = 0.019
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSAHDSYELRYFNIN 432
K+YLKKN+LR +V ++ +SYELRYF IN
Sbjct: 88 KKYLKKNNLRDW-LRVVANSKESYELRYFQIN 118
>BC035566-1|AAH35566.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 63.7 bits (148), Expect = 3e-10
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEGKTNNLGNHVV-IARDKTKVAINADIPFSKRY 319
V+D +D FE++L+ER+KV GK NLG VV I R K+K+ + +++PFSKRY
Sbjct: 29 VEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRY 82
Score = 37.9 bits (84), Expect = 0.019
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSAHDSYELRYFNIN 432
K+YLKKN+LR +V ++ +SYELRYF IN
Sbjct: 88 KKYLKKNNLRDW-LRVVANSKESYELRYFQIN 118
>AL031847-9|CAI19448.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 63.7 bits (148), Expect = 3e-10
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEGKTNNLGNHVV-IARDKTKVAINADIPFSKRY 319
V+D +D FE++L+ER+KV GK NLG VV I R K+K+ + +++PFSKRY
Sbjct: 29 VEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRY 82
Score = 37.9 bits (84), Expect = 0.019
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSAHDSYELRYFNIN 432
K+YLKKN+LR +V ++ +SYELRYF IN
Sbjct: 88 KKYLKKNNLRDW-LRVVANSKESYELRYFQIN 118
>AF136171-1|AAP97261.1| 128|Homo sapiens heparin-binding protein
HBp15 protein.
Length = 128
Score = 63.7 bits (148), Expect = 3e-10
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEGKTNNLGNHVV-IARDKTKVAINADIPFSKRY 319
V+D +D FE++L+ER+KV GK NLG VV I R K+K+ + +++PFSKRY
Sbjct: 29 VEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRY 82
Score = 37.9 bits (84), Expect = 0.019
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSAHDSYELRYFNIN 432
K+YLKKN+LR +V ++ +SYELRYF IN
Sbjct: 88 KKYLKKNNLRDW-LRVVANSKESYELRYFQIN 118
>BC107708-1|AAI07709.1| 122|Homo sapiens RPL22L1 protein protein.
Length = 122
Score = 61.3 bits (142), Expect = 2e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEGKTNNLGNHVVIARDKTKVAINADIPFSKRY 319
V+D D G FE++L+E+VKV GKT NLGN V I R K K+ + ++ FSKRY
Sbjct: 24 VEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSKRY 76
Score = 34.7 bits (76), Expect = 0.18
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSAHDSYELRYFNIN 432
K+YLKKN+LR +V S ++YELRYF I+
Sbjct: 82 KKYLKKNNLRDW-LRVVASDKETYELRYFQIS 112
>BC062731-1|AAH62731.1| 132|Homo sapiens RPL22L1 protein protein.
Length = 132
Score = 61.3 bits (142), Expect = 2e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +2
Query: 161 VKDSFLDVGTFEKYLKERVKVEGKTNNLGNHVVIARDKTKVAINADIPFSKRY 319
V+D D G FE++L+E+VKV GKT NLGN V I R K K+ + ++ FSKRY
Sbjct: 34 VEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSKRY 86
Score = 34.7 bits (76), Expect = 0.18
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 337 KRYLKKNHLRGTGSELVVSAHDSYELRYFNIN 432
K+YLKKN+LR +V S ++YELRYF I+
Sbjct: 92 KKYLKKNNLRDW-LRVVASDKETYELRYFQIS 122
>BC132701-1|AAI32702.1| 232|Homo sapiens chromosome 9 open reading
frame 106 protein.
Length = 232
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = -2
Query: 124 IFFLQPLPRIWPLL-TPFLPV 65
+F +PLPR+WPL TPFLP+
Sbjct: 28 LFSPRPLPRLWPLPGTPFLPI 48
>BC132699-1|AAI32700.1| 232|Homo sapiens chromosome 9 open reading
frame 106 protein.
Length = 232
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = -2
Query: 124 IFFLQPLPRIWPLL-TPFLPV 65
+F +PLPR+WPL TPFLP+
Sbjct: 28 LFSPRPLPRLWPLPGTPFLPI 48
>AK092588-1|BAC03921.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ35269 fis, clone PROST2005466. ).
Length = 232
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = -2
Query: 124 IFFLQPLPRIWPLL-TPFLPV 65
+F +PLPR+WPL TPFLP+
Sbjct: 28 LFSPRPLPRLWPLPGTPFLPI 48
>BC151219-1|AAI51220.1| 581|Homo sapiens matrilin 4 protein.
Length = 581
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 180 SKKLSLTRVCPLNVKLKA*SSSCNLCREFGH 88
S+ LS +CP +L+A SCN CRE GH
Sbjct: 314 SEGLSYRCLCPEGRQLQADGKSCNRCRE-GH 343
>BC141811-1|AAI41812.1| 540|Homo sapiens matrilin 4 protein.
Length = 540
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 180 SKKLSLTRVCPLNVKLKA*SSSCNLCREFGH 88
S+ LS +CP +L+A SCN CRE GH
Sbjct: 273 SEGLSYRCLCPEGRQLQADGKSCNRCRE-GH 302
>BC131763-1|AAI31764.1| 581|Homo sapiens matrilin 4 protein.
Length = 581
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 180 SKKLSLTRVCPLNVKLKA*SSSCNLCREFGH 88
S+ LS +CP +L+A SCN CRE GH
Sbjct: 314 SEGLSYRCLCPEGRQLQADGKSCNRCRE-GH 343
>AL021578-3|CAB46380.1| 622|Homo sapiens matrilin 4 protein.
Length = 622
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 180 SKKLSLTRVCPLNVKLKA*SSSCNLCREFGH 88
S+ LS +CP +L+A SCN CRE GH
Sbjct: 355 SEGLSYRCLCPEGRQLQADGKSCNRCRE-GH 384
>AL021578-2|CAB39280.1| 581|Homo sapiens matrilin 4 protein.
Length = 581
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 180 SKKLSLTRVCPLNVKLKA*SSSCNLCREFGH 88
S+ LS +CP +L+A SCN CRE GH
Sbjct: 314 SEGLSYRCLCPEGRQLQADGKSCNRCRE-GH 343
>AL021578-1|CAI21077.1| 432|Homo sapiens matrilin 4 protein.
Length = 432
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 180 SKKLSLTRVCPLNVKLKA*SSSCNLCREFGH 88
S+ LS +CP +L+A SCN CRE GH
Sbjct: 165 SEGLSYRCLCPEGRQLQADGKSCNRCRE-GH 194
>AK074597-1|BAC11083.1| 540|Homo sapiens protein ( Homo sapiens
cDNA FLJ90116 fis, clone HEMBA1006902, highly similar to
Homo sapiens mRNA for matrilin-4. ).
Length = 540
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 180 SKKLSLTRVCPLNVKLKA*SSSCNLCREFGH 88
S+ LS +CP +L+A SCN CRE GH
Sbjct: 273 SEGLSYRCLCPEGRQLQADGKSCNRCRE-GH 302
>AK074595-1|BAC11081.1| 488|Homo sapiens protein ( Homo sapiens
cDNA FLJ90114 fis, clone HEMBA1006749, highly similar to
Matrilin 4 isoform 2 precursor. ).
Length = 488
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 180 SKKLSLTRVCPLNVKLKA*SSSCNLCREFGH 88
S+ LS +CP +L+A SCN CRE GH
Sbjct: 221 SEGLSYRCLCPEGRQLQADGKSCNRCRE-GH 250
>AJ007581-1|CAA07569.1| 581|Homo sapiens matrilin-4 protein.
Length = 581
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 180 SKKLSLTRVCPLNVKLKA*SSSCNLCREFGH 88
S+ LS +CP +L+A SCN CRE GH
Sbjct: 314 SEGLSYRCLCPEGRQLQADGKSCNRCRE-GH 343
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,951,784
Number of Sequences: 237096
Number of extensions: 1422070
Number of successful extensions: 2940
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2922
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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