Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_L09
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   2.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.5  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 230 RGTCSEGRHSRSSPSVVDLL 289
           RGT  EG   R  PSV  LL
Sbjct: 54  RGTIFEGHDDREQPSVYPLL 73


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = +1

Query: 136 IGVYIDPRVRTGFRYKVRPMQAIDALPLSVKPRYLFGGKALTLQSIG 276
           +G   DP      R KV  ++ +     SV+P+ + G    ++  +G
Sbjct: 551 MGPSYDPMAVVSPRLKVHGIRGLRVADASVQPQVISGNPVASVNMVG 597


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 106 PQPAPHQMP 132
           PQP+PHQ P
Sbjct: 23  PQPSPHQSP 31


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 125 KCRLLGCTLILELEPDSDTKLDRCRLS 205
           + RLLG  L LE     D  + RC  S
Sbjct: 287 RTRLLGSVLALEAVTLEDNGIYRCSAS 313


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 125 KCRLLGCTLILELEPDSDTKLDRCRLS 205
           + RLLG  L LE     D  + RC  S
Sbjct: 287 RTRLLGSVLALEAVTLEDNGIYRCSAS 313


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 296 SRRANPRPMDW 264
           SRR +P P DW
Sbjct: 411 SRRTSPPPEDW 421


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,990
Number of Sequences: 438
Number of extensions: 3721
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)