Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_L08
(441 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 40 0.001
03_02_0485 - 8808139-8808618 38 0.003
03_02_0484 + 8805053-8805538 38 0.003
03_02_0483 - 8804021-8804485 38 0.003
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.011
01_01_0227 + 1933247-1933699 36 0.011
11_02_0041 - 7669692-7670312 36 0.014
01_01_0229 - 1943473-1943922 36 0.014
01_01_0231 + 1951047-1951499 36 0.019
02_02_0077 - 6586638-6587165 35 0.025
03_02_0478 + 8775892-8776377 35 0.033
03_05_0543 - 25404630-25405408,25405461-25405605 33 0.077
01_01_0599 - 4448290-4448790 33 0.10
12_02_1174 - 26696869-26698191 33 0.13
12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634... 31 0.54
09_01_0140 + 2083885-2083969,2084178-2084653 29 1.7
01_05_0519 - 22897277-22897986,22898126-22898225 29 1.7
02_05_0494 + 29486960-29487454 28 2.9
04_03_0433 + 15878709-15878798,15879271-15879336,15880608-158807... 28 3.8
08_01_0601 - 5268520-5271112,5272448-5272950 27 5.1
12_02_0780 + 23094989-23095380,23096132-23096573,23096687-230973... 27 6.7
11_04_0443 - 17808897-17809110,17809169-17813652 27 6.7
07_03_0036 + 12694304-12694408,12694551-12694652,12694867-126949... 27 6.7
01_05_0515 - 22884642-22885160 27 6.7
11_06_0713 + 26524984-26525276,26526008-26526434,26526550-265271... 27 8.8
10_08_0506 + 18390892-18391373,18392699-18392798,18393152-183934... 27 8.8
05_06_0037 + 25095452-25096049,25097093-25097280,25097926-25098429 27 8.8
>10_08_0141 + 15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = +3
Query: 330 KFPRRYQLPEGCDVDALQSRLSSDGVLSITVPLERPQ 440
+F ++ +P+GCD+ A+Q+RL DGV+ +T+P +PQ
Sbjct: 978 RFRLQFPVPDGCDLKAIQARL-HDGVIRVTLPGVKPQ 1013
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +3
Query: 288 DHEEKMDEHGWVSR---KFPRRYQLPEGCDVDALQSRLSSDGVLSITVPLERPQ 440
+ EEK D+ V R KF RR++LPE + +++ + + GVL++TVP E P+
Sbjct: 96 EQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMEN-GVLTVTVPKEEPK 148
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +3
Query: 288 DHEEKMDEHGWVSR---KFPRRYQLPEGCDVDALQSRLSSDGVLSITVPLERPQ 440
+ EEK D+ V R KF RR++LPE + +++ + + GVL++TVP E P+
Sbjct: 98 EQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMEN-GVLTVTVPKEEPK 150
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +3
Query: 288 DHEEKMDEHGWVSR---KFPRRYQLPEGCDVDALQSRLSSDGVLSITVPLERPQ 440
+ EEK D+ V R KF RR++LPE + +++ + + GVL++TVP E P+
Sbjct: 91 EQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMEN-GVLTVTVPKEEPK 143
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 36.3 bits (80), Expect = 0.011
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Frame = +3
Query: 204 FQVNLDGQHFAPEEISVKTVHGFIVL*A-----DHEEKMDEHGWVSR---KFPRRYQLPE 359
F+ +L G EE+ V+ G +++ + + E+K D+ V R +F RR++LPE
Sbjct: 56 FKADLPG--VKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPE 113
Query: 360 GCDVDALQSRLSSDGVLSITVP 425
VD +++ L +GVL++TVP
Sbjct: 114 NAKVDQVKAGL-ENGVLTVTVP 134
>01_01_0227 + 1933247-1933699
Length = 150
Score = 36.3 bits (80), Expect = 0.011
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 324 SRKFPRRYQLPEGCDVDALQSRLSSDGVLSITVPLE 431
S KF RR++LP G VD + + + +GVL++TVP E
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>11_02_0041 - 7669692-7670312
Length = 206
Score = 35.9 bits (79), Expect = 0.014
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +3
Query: 330 KFPRRYQLPEGCDVDALQSRLSSDGVLSITVP 425
+F RR+++P G DV + +RL DGVL++TVP
Sbjct: 141 RFWRRFRMPPGADVGRVAARL-DDGVLTVTVP 171
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.9 bits (79), Expect = 0.014
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Frame = +3
Query: 204 FQVNLDGQHFAPEEISVKTVHGFIVL*A-----DHEEKMDEHGWVSR---KFPRRYQLPE 359
F+ +L G EE+ V+ G +++ + + E+K D+ V R +F RR++LPE
Sbjct: 55 FKADLPG--VKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPE 112
Query: 360 GCDVDALQSRLSSDGVLSITVP 425
VD +++ + +GVL++TVP
Sbjct: 113 NAKVDQVKASM-ENGVLTVTVP 133
>01_01_0231 + 1951047-1951499
Length = 150
Score = 35.5 bits (78), Expect = 0.019
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Frame = +3
Query: 204 FQVNLDGQHFAPEEISVKTVHGFIVL*A-----DHEEKMDEHGWVSR---KFPRRYQLPE 359
F+ +L G EE+ V+ G +++ + + E+K D+ V R +F RR++LPE
Sbjct: 56 FKADLPG--VKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPE 113
Query: 360 GCDVDALQSRLSSDGVLSITVP 425
VD +++ + +GVL++TVP
Sbjct: 114 NAKVDQVKAGM-ENGVLTVTVP 134
>02_02_0077 - 6586638-6587165
Length = 175
Score = 35.1 bits (77), Expect = 0.025
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 330 KFPRRYQLPEGCDVDALQSRLSSDGVLSITVPLERP 437
KF RR+ LPE D+D +++ DGVL++TV + P
Sbjct: 117 KFMRRFPLPESADLDGVRAEY-KDGVLTVTVDKKPP 151
>03_02_0478 + 8775892-8776377
Length = 161
Score = 34.7 bits (76), Expect = 0.033
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +3
Query: 288 DHEEKMDEHGWVSR---KFPRRYQLPEGCDVDALQSRLSSDGVLSITVPLE 431
+ EEK D+ V R KF RR++LP+ + +++ + +GVL++TVP E
Sbjct: 98 EQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASM-ENGVLTVTVPKE 147
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 33.5 bits (73), Expect = 0.077
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 198 SKFQVNLDGQHFAPEEISVKTV-HGFIVL*ADHEEKMDEHGWVSRKFPRRYQLPEGCDVD 374
+ ++LD F EEI V HG L E + + W +F + +QLP C+VD
Sbjct: 39 NSIHLSLDQLGFKREEIRVLVDNHGH--LRTRGERPVAGNRW--SRFQKDFQLPADCNVD 94
Query: 375 ALQSRLSSDGVLSITVPLERP 437
++++ ++ L+IT+P + P
Sbjct: 95 GIRAKFENE-ALTITLPKKTP 114
>01_01_0599 - 4448290-4448790
Length = 166
Score = 33.1 bits (72), Expect = 0.10
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 330 KFPRRYQLPEGCDVDALQSRLSSDGVLSITV 422
KF R++ LP+ DVD + S + DGVL++TV
Sbjct: 118 KFMRKFVLPDNADVDKI-SAVCQDGVLTVTV 147
>12_02_1174 - 26696869-26698191
Length = 440
Score = 32.7 bits (71), Expect = 0.13
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 231 FAPEEISVKTV-HGFIVL*ADHEEKMDEHGWVSRKFPRRYQLPEGCDVDALQSRLSSDGV 407
F E++ V+ HG + + WV +F + +LP+ CD DA+++R D
Sbjct: 33 FRKEQVRVQVDNHGMLRATGERPPAARGGRWV--RFKKDLRLPDNCDADAVRARF-DDHK 89
Query: 408 LSITVPL 428
L IT+PL
Sbjct: 90 LIITLPL 96
>12_02_0318 - 17457182-17462232,17462745-17462955,17463356-17463403,
17466161-17466346
Length = 1831
Score = 30.7 bits (66), Expect = 0.54
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -3
Query: 169 SWRRFESCFQGP*NFLDGCGLTRLRTSSGVRARANCLLFRSLGRSICRRYG 17
SW+ S P NF+ L ++T++G R NCLLF S+ R G
Sbjct: 1360 SWKMLGSAL--PDNFMSSINLRWVKTTAGYRHPKNCLLFGPACSSLHRDDG 1408
>09_01_0140 + 2083885-2083969,2084178-2084653
Length = 186
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 71 PRSDARRSPKSRQSATV*KV-LWALETALEPPPRLLLDHQS 190
PR P Q+AT ++ LW+ A PPPRL LD S
Sbjct: 16 PRGGGAGGPAGEQAATSFQIFLWSF--ACTPPPRLALDSPS 54
>01_05_0519 - 22897277-22897986,22898126-22898225
Length = 269
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 309 EHGWVSRKFPRRYQLPEGCDVDALQSRLSSDGVLSITVP 425
+HG + + + +QLP C++DA+ RL + VL +TVP
Sbjct: 55 QHGGL--RLNKVFQLPPTCNLDAITGRLEA-SVLVLTVP 90
>02_05_0494 + 29486960-29487454
Length = 164
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 342 RYQLPEGCDVDALQSRLSSDGVLSITVP 425
+++LPE D +R++ DGVL++TVP
Sbjct: 111 QFRLPEDAAADEASARMA-DGVLTVTVP 137
>04_03_0433 +
15878709-15878798,15879271-15879336,15880608-15880743,
15880813-15880900,15881674-15881826,15882214-15882376,
15882446-15882630,15882696-15882869,15883222-15883367,
15883498-15883621,15883702-15883882,15884986-15885145,
15885235-15885276,15885349-15885467,15885548-15885746,
15886263-15886394,15887546-15887649,15887750-15887929,
15888202-15888249
Length = 829
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = -2
Query: 227 LPIKIDLKLALVGFDGRARVVEEVRELFPRPIELFRRLRTD 105
LP+++D AL F + ++E+R + P+ ++ F +L ++
Sbjct: 537 LPVRVDSVFALRSFVEACKDLDEIRPILPQLLDEFFKLMSE 577
>08_01_0601 - 5268520-5271112,5272448-5272950
Length = 1031
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -2
Query: 404 SVRRQPRLESVDITTFRQLVSPWKLSRHPS---VLIHLLFMISLKDDKSV 264
SV+R L+++D++ PW+L R+PS V+ L S D+++V
Sbjct: 703 SVKRLRNLQTLDVSRTDVEALPWRLWRNPSLRHVMARRLAAWSAPDERAV 752
>12_02_0780 +
23094989-23095380,23096132-23096573,23096687-23097311,
23098240-23098280,23098371-23098439,23098779-23098879,
23099422-23099500,23099946-23100044,23100123-23100191,
23100283-23100332,23100416-23100497,23100997-23101091,
23101263-23101395
Length = 758
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 368 ITTFRQLVSPWKLSRHPSVLIHL 300
I TFRQ VS K RHP++L+ +
Sbjct: 517 IQTFRQEVSLMKKLRHPNILLFM 539
>11_04_0443 - 17808897-17809110,17809169-17813652
Length = 1565
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 136 P*NFLDGCGLTRLRTSSGVRARANCLLFRSLGRSICRRYG 17
P +FLD LRT+ G ++ CLLF +IC G
Sbjct: 1124 PKDFLDKICKKWLRTTMGYKSPNECLLFDHKHSAICMEDG 1163
>07_03_0036 +
12694304-12694408,12694551-12694652,12694867-12694947,
12696475-12696525,12697308-12697473,12698759-12698877,
12698975-12699073,12699684-12699764,12699845-12699927,
12701177-12701402,12704272-12704439,12706408-12706800
Length = 557
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 330 KFPRRYQLPEGCDVDALQSRLSSDGVLSITV 422
K+P R +P G +VD + L G L++TV
Sbjct: 280 KWPHRLVVPLGVNVDTSELELKPQGRLTVTV 310
>01_05_0515 - 22884642-22885160
Length = 172
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 339 RRYQLPEGCDVDALQSRLSSDGVLSITVPLERP 437
R +QLP DVD + +R L +TVP +RP
Sbjct: 79 REFQLPPAADVDRIAARFDG-ATLCLTVP-KRP 109
>11_06_0713 +
26524984-26525276,26526008-26526434,26526550-26527171,
26528059-26528099,26528181-26528249,26528565-26528665,
26529300-26529378,26529955-26530053,26530129-26530197,
26530326-26530375,26530482-26530548,26531031-26531125,
26534469-26534856
Length = 799
Score = 26.6 bits (56), Expect = 8.8
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 368 ITTFRQLVSPWKLSRHPSVLIHLLFMISLK 279
I TFRQ V+ K RHP+V++ + + SL+
Sbjct: 478 ILTFRQEVALMKKLRHPNVILFMGAVASLQ 507
>10_08_0506 +
18390892-18391373,18392699-18392798,18393152-18393485,
18393756-18393868,18394437-18394565,18394746-18394839,
18394942-18395025,18395265-18395896,18396662-18396951,
18397098-18397242,18397876-18397973,18398075-18398156,
18398607-18398612,18398845-18398928
Length = 890
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 100 VSSVRNRLKSSMGLGNSSRTSSTTLARPSKPTRASFKSILMGNTS 234
+ S+ L + L NSS SS+T + SK ++ S + +MG TS
Sbjct: 409 IISIIELLSALSILQNSSVVSSSTYPKSSKVSQQSCSADVMGGTS 453
>05_06_0037 + 25095452-25096049,25097093-25097280,25097926-25098429
Length = 429
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +2
Query: 23 SPTDGTP*AP-KQQAIRPRSDARRSPK---SRQSATV*KVLWALETALEPPP 166
SP +P P +A +P + +RR K S + T+ + LW + + L PPP
Sbjct: 35 SPEGSSPRDPDSDEAEQPDTPSRRGVKDDISELTETLTRRLWGVASFLAPPP 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,596,176
Number of Sequences: 37544
Number of extensions: 257931
Number of successful extensions: 902
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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