Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_L04
         (313 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens ...    32   0.41 
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    29   2.2  
BC016950-1|AAH16950.1|   75|Homo sapiens KLHL23 protein protein.       28   5.0  
AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens ...    28   5.0  
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    27   8.8  

>AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42815 fis, clone BRCAN2014143. ).
          Length = 189

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 8/41 (19%)
 Frame = +2

Query: 152 HSLTFLCIFS--CLYNHIF---CI---IYTYNS*FIFLYPY 250
           H+  ++C++   C+Y H++   CI   +YTY   +I +YPY
Sbjct: 2   HTYIYMCVYPYICIYMHVYPCICIYLHVYTYICMYIHIYPY 42


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 147 IIIH*LFYVFSHVYIITFFVSYIHIILDSYFYTLIKCITEI 269
           I ++  FY+F+++Y+  F   YI+I L  Y Y  +   T I
Sbjct: 33  IYLYIYFYIFTYIYLYIFI--YIYICLYIYLYIYLYIFTYI 71


>BC016950-1|AAH16950.1|   75|Homo sapiens KLHL23 protein protein.
          Length = 75

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 161 TFLCIFSCLYNHIFCIIYTYNS*FIFLY 244
           T +CI  C+Y ++   IYTY   ++++Y
Sbjct: 41  TCVCIHICVYIYMCVYIYTYIRIYVYIY 68



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 168 YVFSHVYIITFFVSYIHIILDSYFYTLI 251
           YV++H+Y+     SYI   +  Y YT +
Sbjct: 4   YVYTHIYVFICMRSYIRAYVYIYVYTYV 31


>AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46559 fis, clone THYMU3040126. ).
          Length = 303

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 153 IH*LFYVFSHVYIITFFVSYIHIILDSYFYT 245
           I+   YV++H YI T+   Y+ I   +Y +T
Sbjct: 13  IYTCIYVYTHTYIYTYTCMYVCIYSHTYIHT 43



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +2

Query: 164 FLCIFSCLYNHIFCIIYTYNS*FIFLYPYKMYH 262
           ++ I++C+Y +    IYTY   ++ +Y +   H
Sbjct: 10  YVHIYTCIYVYTHTYIYTYTCMYVCIYSHTYIH 42



 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 164 FLCIFSCLYNHIFCIIYTYNS*FIFLY 244
           ++C+  C+Y HI+  IY Y   +I+ Y
Sbjct: 4   YMCM--CVYVHIYTCIYVYTHTYIYTY 28


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 152 HSLTFLCIFSCLYNHIFCIIYTYNS*FIFLY 244
           H+  ++CIF C + H +  +Y+Y    I +Y
Sbjct: 52  HAYAYICIFICTHMHTY--VYSYTRICIHMY 80



 Score = 27.5 bits (58), Expect = 8.8
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +2

Query: 152 HSLTFLCIFSCLYNHIFCIIYTYNS*FIFLYPY 250
           H+  ++CIF   + H +  I+ +   +I++Y Y
Sbjct: 84  HAYAYICIFIYTHMHTYMYIHMHAYAYIYVYSY 116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,433,154
Number of Sequences: 237096
Number of extensions: 747764
Number of successful extensions: 1539
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)