Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_L04
(313 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 27 2.1
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 27 3.6
U70852-4|AAK29816.2| 93|Caenorhabditis elegans Hypothetical pr... 26 4.8
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 26 4.8
Z98860-1|CAB11544.1| 677|Caenorhabditis elegans Hypothetical pr... 26 6.4
AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine r... 26 6.4
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 25 8.4
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p... 25 8.4
U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead transc... 25 8.4
U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead transc... 25 8.4
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 25 8.4
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 25 8.4
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 58 SPIPRRDSTAPPKRSP*RR 2
SP RRD PP+RSP RR
Sbjct: 112 SPPRRRDRRTPPRRSPGRR 130
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 26.6 bits (56), Expect = 3.6
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 171 HKKVNE*LFSFSQSRGLGHCSDGWTSTYDCVSHSLANFLQFLEG--IPRRRRNGP 13
+ ++NE + FS + GH + + YD V HSL+N +Q E +PR R P
Sbjct: 197 YDEINE-VPRFSDNPVFGHLNLPEVTIYDAVFHSLSN-VQTTESYTLPRELRTWP 249
>U70852-4|AAK29816.2| 93|Caenorhabditis elegans Hypothetical
protein F45E4.5 protein.
Length = 93
Score = 26.2 bits (55), Expect = 4.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 96 WSSRRYSGPGHGF 134
W RYS PGHGF
Sbjct: 40 WGRPRYSPPGHGF 52
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +2
Query: 104 PSLQWPRPRLWLKENNHS---LTFLCIFSCLYNHIFCIIY 214
P L WP R + N LTF+CI S N + C +Y
Sbjct: 598 PKLLWPFSRKSITCNLSDCVLLTFVCIPSAFANLLLCSLY 637
>Z98860-1|CAB11544.1| 677|Caenorhabditis elegans Hypothetical
protein Y26G10.1 protein.
Length = 677
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 105 RRYSGPGHGFG*RKIIIH*LFYVFSHVYIITFFVSYIHI 221
RR G+ +++I+ +FY+F II + V Y H+
Sbjct: 600 RRIGFVDTGYPGYQMLINRIFYIFPFGSIICYIVLYFHV 638
>AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine
receptor, class t protein8 protein.
Length = 350
Score = 25.8 bits (54), Expect = 6.4
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +2
Query: 131 LWLKENNHSLTFLCIFSCLYNHIFCIIYTY 220
+WL + + F + C+++ I C IY +
Sbjct: 231 IWLYKTRRQIIFQALMLCVFHGIVCGIYEF 260
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 70 SGQLSPIPRRDSTAPPKR 17
SG ++P RR+S +PP+R
Sbjct: 295 SGSVAPSVRRESASPPRR 312
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 70 SGQLSPIPRRDSTAPPKR 17
SG ++P RR+S +PP+R
Sbjct: 295 SGSVAPSVRRESASPPRR 312
>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
protein C32E8.11 protein.
Length = 1927
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Frame = -2
Query: 147 FSFSQSRGLGHC----SDGWTSTYDCVSH 73
+ S G G+C +D WT Y C +H
Sbjct: 55 YKMHSSSGSGYCDCGDADAWTEGYACANH 83
>U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform b protein.
Length = 280
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 76 SFSGQLSPIPRRDSTAPPKRSP 11
S SG+ SP P + S +PP +P
Sbjct: 165 SGSGETSPSPSQPSISPPNENP 186
>U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform a protein.
Length = 300
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 76 SFSGQLSPIPRRDSTAPPKRSP 11
S SG+ SP P + S +PP +P
Sbjct: 185 SGSGETSPSPSQPSISPPNENP 206
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 70 SGQLSPIPRRDSTAPPKR 17
SG ++P RR+S +PP+R
Sbjct: 295 SGSVAPSVRRESASPPRR 312
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 70 SGQLSPIPRRDSTAPPKR 17
SG ++P RR+S +PP+R
Sbjct: 295 SGSVAPSVRRESASPPRR 312
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,782,131
Number of Sequences: 27780
Number of extensions: 111652
Number of successful extensions: 484
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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