Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_L02
(632 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1152 + 9170628-9171899 42 5e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 41 7e-04
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 41 7e-04
01_06_0824 - 32243495-32244319,32244449-32244859 40 0.002
11_02_0014 - 7352619-7352918,7353173-7353418 38 0.007
04_04_0619 + 26652923-26653267,26653440-26654273 38 0.009
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 37 0.012
11_02_0012 - 7346282-7347136,7347234-7347593 36 0.027
11_02_0011 - 7337618-7338496,7338596-7338991 36 0.027
11_01_0767 + 6438648-6438809,6439146-6440000 33 0.14
11_01_0750 - 6315126-6315896,6316371-6316784 31 1.0
11_01_0771 + 6453130-6454488 30 1.8
09_02_0344 - 7582312-7582559,7583761-7583779 30 1.8
10_06_0024 - 9733994-9734093,9734814-9734870,9734954-9735040,973... 29 3.1
07_03_1724 + 29056386-29056717,29057026-29057245,29057334-290575... 28 5.4
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 28 7.1
04_04_1192 + 31611804-31612113,31612235-31614058,31614098-316148... 28 7.1
02_05_1302 + 35567585-35567848,35568303-35568368,35568475-355685... 28 7.1
>01_01_1152 + 9170628-9171899
Length = 423
Score = 41.5 bits (93), Expect = 5e-04
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Frame = +3
Query: 162 KSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN-DNVTKAVFTDLNQKVRSIKGVD 338
++ I+S S LA +A + GE+ ELL + P+ + ++ T L ++R + +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLP--N 116
Query: 339 LKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFG-KNEEAANIINTWVEDHTNKRIR 515
A V++ G L +FA + + + + +F + E+A +N +V D T IR
Sbjct: 117 TSFACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 516 NLVDPSSV 539
+++ P+SV
Sbjct: 177 DVLPPNSV 184
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 538 LDSSTQCVLVNAIYFKGSWKDKFDKELT 621
+DSST VL NA++FKG+W F T
Sbjct: 184 VDSSTVVVLANAVHFKGTWSLPFHPSAT 211
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1
Query: 538 LDSSTQCVLVNAIYFKGSWKDKFDKELTQD 627
+D +T+ VL NA+YFKG+W +KFD T+D
Sbjct: 30 VDHTTRLVLGNALYFKGAWTEKFDASKTKD 59
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1
Query: 538 LDSSTQCVLVNAIYFKGSWKDKFDKELTQD 627
+D +T+ VL NA+YFKG+W +KFD T+D
Sbjct: 238 VDHTTRLVLGNALYFKGAWTEKFDASKTKD 267
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +1
Query: 538 LDSSTQCVLVNAIYFKGSWKDKFDKELTQD 627
++ +T+ VL NA+YFKG+W +KFD T+D
Sbjct: 490 INHNTKLVLANALYFKGAWAEKFDVSKTED 519
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 538 LDSSTQCVLVNAIYFKGSWKDKFDKELTQD 627
+D +T VL NA+YFKG W+ KFD T D
Sbjct: 166 VDRATPAVLGNALYFKGDWESKFDARSTSD 195
Score = 39.1 bits (87), Expect = 0.003
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
Frame = +3
Query: 159 DKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN--------DNVTKAVFTDLNQK 314
DK++ +S S+ LA L + GE+ D+++ + +V D +
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 315 VRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVE 491
G ++ AN V++ L +A V D + +E + ++F K EEA IN W E
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 492 DHTNKRIRNLVDPSSV 539
T RI++ + +V
Sbjct: 151 SATAGRIKDFLPKDAV 166
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +1
Query: 550 TQCVLVNAIYFKGSWKDKFDKELT 621
T VLVNAIYFKG W D F +E T
Sbjct: 115 TTLVLVNAIYFKGKWSDPFPREST 138
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 544 SSTQCVLVNAIYFKGSWKDKFDKELTQDR 630
SST+CVL NA++FK +W KF+ TQ R
Sbjct: 146 SSTKCVLANAMHFKATWGRKFESYDTQRR 174
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 37.1 bits (82), Expect = 0.012
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 231 ESHDELLKAIDFPNDNVTKAVFTDLNQKVRSI--KGVDLKLANKVYIANGNELNDQFAVV 404
+ HD LLK+ NDN+TK + NQ + + KG D K +KV N+Q +
Sbjct: 467 KEHDTLLKSSVELNDNLTKTA-EERNQILECLKEKGGDNKALHKVIARLQRISNEQEKTI 525
Query: 405 S--RDVFNSEVQNLNFGKNEEAANI 473
+ R FN+E++N + G +E + +
Sbjct: 526 TGLRQGFNAELENKSLGTSESISRM 550
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 550 TQCVLVNAIYFKGSWKDKFDKELT 621
T VLVNAIYFKG W + F +E T
Sbjct: 153 TALVLVNAIYFKGKWSNPFPRERT 176
Score = 31.1 bits (67), Expect = 0.76
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Frame = +3
Query: 153 NPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKG 332
N +++V+ S S+ LA +A + G + DEL+ + A DL + VR +
Sbjct: 28 NSNRNVVFSPVSLYAALALVASGARGTTLDELVALLG-------AASLDDLEESVR--RA 78
Query: 333 VDLKLANKVYIANGNELNDQFAVV--SRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTN 503
V++ LA++ + G ++ V R + +F + +++ IN WV TN
Sbjct: 79 VEVGLADESE-SGGPRVSYACGVWHDERLALKPAYRAADFQRQPKSSRKKINKWVSKATN 137
Query: 504 KRIRNLVDPSSV 539
K IR ++ SV
Sbjct: 138 KLIREILPDGSV 149
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 35.9 bits (79), Expect = 0.027
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +3
Query: 159 DKSVILSAFSVMIPLAQLAIASTGESHDELLK-----AIDFPNDNVTKAVFTDLNQKVRS 323
+K+++ S S+ LA +A + G + DELL ++D ++V +AV L + S
Sbjct: 30 NKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESAS 89
Query: 324 IKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHT 500
G + A V+ EL + + + + + NF + + + IN WV T
Sbjct: 90 -GGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKAT 148
Query: 501 NKRIRNLVDPSSV 539
NK I ++ SV
Sbjct: 149 NKLIPEILPDGSV 161
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 550 TQCVLVNAIYFKGSWKDKFDKELT 621
T VLVNAIYFKG W + F + T
Sbjct: 165 TALVLVNAIYFKGKWSNPFPRSST 188
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 550 TQCVLVNAIYFKGSWKDKFDKELTQDR 630
T+ V+ NAIYFKG W FDK T +R
Sbjct: 87 TRHVVGNAIYFKGEWLAPFDKSDTAER 113
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 538 LDSSTQCVLVNAIYFKGSWKDKFDKELTQDR 630
+D +T VL +A+YF+G W D+ D T ++
Sbjct: 167 IDQNTGLVLGSALYFRGRWLDRDDLRRTTEQ 197
>11_01_0771 + 6453130-6454488
Length = 452
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 550 TQCVLVNAIYFKGSWKDKFDKELTQ 624
T VL NAIYFKG W F++ T+
Sbjct: 202 TAVVLGNAIYFKGKWDRPFNESDTE 226
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 450 KNEEAANIINTWVEDHTNKRIRNLVDPSSVG 542
K EEA IN W T K I +++ P SVG
Sbjct: 169 KAEEARKQINAWARRATGKLITDVLPPRSVG 199
>09_02_0344 - 7582312-7582559,7583761-7583779
Length = 88
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 571 HLREHTVCYCPTELGSTKFLIRLLVWSSTQVLIMLAASS 455
H H CPTELG + +L W++T I LAA+S
Sbjct: 19 HAAAHGSNSCPTELGRGATIEDILNWTTTVEDISLAAAS 57
>10_06_0024 -
9733994-9734093,9734814-9734870,9734954-9735040,
9736438-9736982,9737086-9737271
Length = 324
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -2
Query: 538 TELGSTKFLIRLLVWSSTQVLIMLAASSFLPKFKFCTSELNTSLDTTA 395
TEL ++ L WSS ++L++L S LP + T+ L+ SL T +
Sbjct: 233 TELAVPSAMMVCLEWSSFEILVLL--SGILPNPQLETAVLSISLSTAS 278
>07_03_1724 +
29056386-29056717,29057026-29057245,29057334-29057530,
29057628-29057988
Length = 369
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 429 VQNLNFGKNEEAANIINTWVEDHTNKRIRNLVDPSSVGQ*HTV 557
V L FGK+ + AN + ++DH R+L+DP ++ H V
Sbjct: 115 VDLLGFGKSPKPANCMYR-LKDHVEMIERSLIDPLNLSSFHLV 156
>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 478 LIMLAASSF--LPKFKFCTSELNTSLDTTAN*SFNSLPLAMYTLLA 347
L++L SF LP C S L SL+ T+N S SLP M L A
Sbjct: 1121 LVILGCPSFSSLPASIRCLSNLK-SLELTSNNSLTSLPEGMQNLTA 1165
>04_04_1192 + 31611804-31612113,31612235-31614058,31614098-31614842,
31615047-31616835,31617136-31617163,31617343-31617794
Length = 1715
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 514 EIWWILVPLDSSTQCVLVNAIYFKGSW 594
++WW+L+ S +C+ VN I F SW
Sbjct: 1610 QLWWLLLSAISRPECLPVNEISFH-SW 1635
>02_05_1302 +
35567585-35567848,35568303-35568368,35568475-35568573,
35569028-35569061,35569147-35569246,35569738-35569813,
35569974-35570315,35570426-35570569,35570840-35571073,
35571149-35571212,35571297-35571340,35571431-35571601
Length = 545
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 109 FPFLSTLCGSMSLANVKAA-RANMVIIIFMLSVTFVF 2
FPFL T + +N+KAA +V ++F +SVT F
Sbjct: 190 FPFLMTRACCEACSNLKAAFLVAVVFLLFCMSVTLYF 226
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,905,693
Number of Sequences: 37544
Number of extensions: 274193
Number of successful extensions: 701
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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