Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_K24
(512 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4C3.08 |mug136||acetylglucosaminyltransferase|Schizosaccharo... 29 0.31
SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr 3|||M... 27 1.6
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 26 3.8
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 3.8
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 5.0
SPBC887.14c |pfh1|pif1|pif1 helicase homolog Pfh1|Schizosaccharo... 25 5.0
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 25 5.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.7
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 6.7
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 25 6.7
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 25 8.8
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 25 8.8
>SPBC4C3.08 |mug136||acetylglucosaminyltransferase|Schizosaccharomyc
es pombe|chr 2|||Manual
Length = 372
Score = 29.5 bits (63), Expect = 0.31
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 84 HEEAQLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAIKYISFDALEET---FTLHSWVALS 254
HE KD F A + F+P+K H + RF Y + + +E++ F +S A
Sbjct: 248 HETPPPFKDYFNAGLFVFKPLKAHYKRLMALARFPKLYDNANMMEQSLLNFAYNSAGAFP 307
Query: 255 WKDEFLSW 278
W E L W
Sbjct: 308 W--ESLDW 313
>SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 609
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 369 TTAMYQSDQFYTTCLLANDGTV 434
TT +Y DQ YTT L GTV
Sbjct: 222 TTTIYSGDQEYTTILAEASGTV 243
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 25.8 bits (54), Expect = 3.8
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 240 WVALSWKDEFLSWIP--SNYGDIKEIQVESH 326
WV W DE+++W+ Y D ++E H
Sbjct: 659 WVIRCWVDEYMTWVAEIGGYLDDSYDELEQH 689
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 3.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 270 LSWIPSNYGDIKEIQVESHLIW 335
LSWI YG++ I +ES L++
Sbjct: 4176 LSWIYKTYGNVAAIPMESILVY 4197
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 25.4 bits (53), Expect = 5.0
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 245 SVIMER*IPVVDTFELWRYKRDTGR---ESFDLDATNGFV*CRCHNCNVSIGPILYDV 409
+++ R I V++ +L K G E DLD T F CRC + I P L+D+
Sbjct: 48 TLLWNRFINVIEWDKLCDEKDSNGSNDDEEDDLDITTLFR-CRCMIFDAKINPALFDL 104
>SPBC887.14c |pfh1|pif1|pif1 helicase homolog
Pfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 805
Score = 25.4 bits (53), Expect = 5.0
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 127 IMNFVQSKITNHPSTLKFASQSST*ASMP*RKPSRCIV 240
++NF +K+ HP ++F Q ++ +P R ++ V
Sbjct: 760 VLNFSPAKVMAHPKVVQFYKQLASVNGLPIRNENKAPV 797
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 25.4 bits (53), Expect = 5.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 395 ILYDVFISQRRYCYLRSSSGTYRYMPII 478
ILYD F+ + RY L S S + + II
Sbjct: 563 ILYDYFVKRNRYGVLHSKSNSVKDAYII 590
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 339 ASKSNDSLPVSLLYLHNSKVSTTGIHLSMITLPNYAT 229
+S + S PVS + HNS S + H S +L + ++
Sbjct: 410 SSSKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSS 446
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1220
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 369 TTAMYQSDQFYTTCLLANDGTVT 437
TT +Y Q YTT L GTV+
Sbjct: 185 TTTVYSGTQEYTTTLATASGTVS 207
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 369 TTAMYQSDQFYTTCLLANDGTVT 437
TT +Y Q YTT L GTV+
Sbjct: 257 TTTVYSGTQEYTTTLATASGTVS 279
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 369 TTAMYQSDQFYTTCLLANDGTVT 437
TT +Y Q YTT L GTV+
Sbjct: 329 TTTVYSGTQEYTTTLATASGTVS 351
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 369 TTAMYQSDQFYTTCLLANDGTVT 437
TT +Y Q YTT L GTV+
Sbjct: 401 TTTVYSGTQEYTTTLATASGTVS 423
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 369 TTAMYQSDQFYTTCLLANDGTVT 437
TT +Y Q YTT L GTV+
Sbjct: 473 TTTVYSGTQEYTTTLATASGTVS 495
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 369 TTAMYQSDQFYTTCLLANDGTVT 437
TT +Y Q YTT L GTV+
Sbjct: 545 TTTVYSGTQEYTTTLATASGTVS 567
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 369 TTAMYQSDQFYTTCLLANDGTVT 437
TT +Y Q YTT L GTV+
Sbjct: 617 TTTVYSGTQEYTTTLATASGTVS 639
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 369 TTAMYQSDQFYTTCLLANDGTVT 437
TT +Y Q YTT L GTV+
Sbjct: 653 TTTVYSGTQEYTTTLATASGTVS 675
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 369 TTAMYQSDQFYTTCLLANDGTVT 437
TT +Y Q YTT L GTV+
Sbjct: 725 TTTVYSGTQEYTTTLATASGTVS 747
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 25.0 bits (52), Expect = 6.7
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 42 VTADECPADREQPSHEEAQLQKDLFCAY 125
+ D P PSH + QKD +Y
Sbjct: 497 IVVDSSPVTENPPSHSDVMGQKDTISSY 524
>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 24.6 bits (51), Expect = 8.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 359 IKQSHSWRPNQMTLYLYLFYISII 288
+ ++HSW P Q +LY +I
Sbjct: 923 VPENHSWLPAQKNFFLYYVECQVI 946
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 8.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 387 SDQFYTTCLLANDGTVTCVPHLAHTGICRSS 479
+D F+ T L + + C+PHL+ + I SS
Sbjct: 186 ADFFFKTHFLFSQLSFECIPHLSDSSIQLSS 216
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,179,212
Number of Sequences: 5004
Number of extensions: 44392
Number of successful extensions: 143
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 206265012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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