Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_K24
(512 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 111 3e-27
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 84 7e-19
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 69 2e-14
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 69 4e-14
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 68 7e-14
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 68 7e-14
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 66 2e-13
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 66 3e-13
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 65 5e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 64 6e-13
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 64 6e-13
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 63 1e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 63 2e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 63 2e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 63 2e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 63 2e-12
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 62 2e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 61 8e-12
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 59 3e-11
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 5e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 29 0.037
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 111 bits (268), Expect = 3e-27
Identities = 51/139 (36%), Positives = 77/139 (55%)
Frame = +3
Query: 96 QLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAIKYISFDALEETFTLHSWVALSWKDEFLS 275
+L++ LFC Y+ RP+ H+ + NV ++ K + FD LHSW+ L W D LS
Sbjct: 46 KLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLS 105
Query: 276 WIPSNYGDIKEIQVESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVPHLA 455
W PS++ I I V+S IW P ++++N+ T Q+ TTCL+ + G+V+CVP +
Sbjct: 106 WKPSDFDGINYIYVKSDDIWVPDISVYNSGDMT-FDQTGIPPTTCLVFSSGSVSCVPSVK 164
Query: 456 HTGICRSSLRRWPYDVPNC 512
H C + WPYD C
Sbjct: 165 HVAKCATDFSSWPYDTHRC 183
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 84.2 bits (199), Expect = 7e-19
Identities = 39/139 (28%), Positives = 69/139 (49%)
Frame = +3
Query: 96 QLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAIKYISFDALEETFTLHSWVALSWKDEFLS 275
+L+ LFC Y+ + P + K++ + +I++ + D T H + L W+ L+
Sbjct: 39 RLKLYLFCDYDRDIIP--EQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLT 96
Query: 276 WIPSNYGDIKEIQVESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVPHLA 455
W S + I I+V+S+ IW P + + + T+ + C++ N GT+ CVP
Sbjct: 97 WKSSEFDSINSIRVKSYEIWVPDIVMHS--VTSVGIDLEMPSVECIVFNSGTILCVPFTT 154
Query: 456 HTGICRSSLRRWPYDVPNC 512
+T +C WPYD+ NC
Sbjct: 155 YTPVCEYDHTWWPYDILNC 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 69.3 bits (162), Expect = 2e-14
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 2/160 (1%)
Frame = +3
Query: 39 AVTADECPADREQPSHEEAQLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAI-KYISFDAL 215
A++ P + E +L DL YN RPV ++ + VK+ + + I +
Sbjct: 4 AISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLK 63
Query: 216 EETFTLHSWVALSWKDEFLSWIPSNYGDIKEIQVESHLIWTPRMALF-NADATTAMYQSD 392
+ T + WV W D L W P +YG + + V S IW P + L+ NAD +
Sbjct: 64 NQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV---- 119
Query: 393 QFYTTCLLANDGTVTCVPHLAHTGICRSSLRRWPYDVPNC 512
T +L + G V P + C + +P+D C
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 68.5 bits (160), Expect = 4e-14
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Frame = +3
Query: 96 QLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAI-KYISFDALEETFTLHSWVALSWKDEFL 272
+L DL YN RPV ++ +V VK+ + + I + ++ T + W+ W+D
Sbjct: 23 RLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKF 82
Query: 273 SWIPSNYGDIKEIQVESHLIWTPRMALF-NADATTAMYQSDQFYTTCLLANDGTVTCVPH 449
W P+ YG + E+ V S IW P + L+ NAD + T +L G V P
Sbjct: 83 QWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGV----TTMTKAILHYTGKVLWTPP 138
Query: 450 LAHTGICRSSLRRWPYDVPNC 512
C +R +P+D C
Sbjct: 139 AIFKSSCEIDVRYFPFDQQTC 159
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 67.7 bits (158), Expect = 7e-14
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Frame = +3
Query: 90 EAQLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAIKYI-SFDALEETFTLHSWVALSWKDE 266
E +L +L +YN RPV + + VK ++ I D + T ++W+ L W D
Sbjct: 55 EKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDY 114
Query: 267 FLSWIPSNYGDIKEIQVESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVP 446
L W S YG +K++++ + +W P + ++N+ A + T ++ ++G+ VP
Sbjct: 115 NLQWNESEYGGVKDLRITPNKLWKPDILMYNS-ADEGF--DGTYQTNVVVTHNGSCLYVP 171
Query: 447 HLAHTGICRSSLRRWPYDVPNC 512
C+ + +P+D +C
Sbjct: 172 PGIFKSTCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 67.7 bits (158), Expect = 7e-14
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Frame = +3
Query: 90 EAQLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAIKYI-SFDALEETFTLHSWVALSWKDE 266
E +L +L +YN RPV + + VK ++ I D + T ++W+ L W D
Sbjct: 55 EKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDY 114
Query: 267 FLSWIPSNYGDIKEIQVESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVP 446
L W S YG +K++++ + +W P + ++N+ A + T ++ ++G+ VP
Sbjct: 115 NLQWNESEYGGVKDLRITPNKLWKPDILMYNS-ADEGF--DGTYQTNVVVTHNGSCLYVP 171
Query: 447 HLAHTGICRSSLRRWPYDVPNC 512
C+ + +P+D +C
Sbjct: 172 PGIFKSTCKIDITWFPFDDQHC 193
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 66.5 bits (155), Expect = 2e-13
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Frame = +3
Query: 81 SHEEAQLQKDLFCAYNYEFRPVKDHKSSVNVKVRFA-IKYISFDALEETFTLHSWVALSW 257
S +E +L +DLF YN RPV++ V+V A ++ I+ + + + W+ W
Sbjct: 24 SEDEERLVRDLFRGYNKLIRPVQNMTEKVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIW 83
Query: 258 KDEFLSWIPSNYGDIKEIQVESHLIWTPRMALF-NADATTAMYQSDQFYTTCLLANDGTV 434
D L W ++YG I +++ +W P + LF NAD + ++ + L+ +G V
Sbjct: 84 TDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEV----RYKSNVLIYPNGDV 139
Query: 435 TCVPHLAHTGICRSSLRRWPYDVPNC 512
VP + C + +P+D C
Sbjct: 140 LWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 65.7 bits (153), Expect = 3e-13
Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Frame = +3
Query: 96 QLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAI-KYISFDALEETFTLHSWVALSWKDEFL 272
+L DL YN RPV + + V ++ + + I + + T + WV SW D L
Sbjct: 31 RLYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKL 90
Query: 273 SWIPSNYGDIKEIQVESHLIWTPRMALF-NADATTAMYQSDQFYTTCLLANDGTVTCVPH 449
W P YG +K + V S IW P + L+ NAD + T + G V P
Sbjct: 91 RWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEV----TLMTKATVYYSGLVVWQPP 146
Query: 450 LAHTGICRSSLRRWPYDVPNC 512
+ C + +PYDV C
Sbjct: 147 AVYKSSCSIDVEFFPYDVQTC 167
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 64.9 bits (151), Expect = 5e-13
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Frame = +3
Query: 96 QLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAI-KYISFDALEETFTLHSWVALSWKDEFL 272
+L DL YN RPV ++ ++ V++ + + I + + T + WV W D L
Sbjct: 36 RLYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKL 95
Query: 273 SWIPSNYGDIKEIQVESHLIWTPRMALF-NADATTAMYQSDQFYTTCLLANDGTVTCVPH 449
W P YG ++ + V S IW P + L+ NAD + T L G V+ P
Sbjct: 96 KWNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEV----TLMTKATLKYTGDVSWKPP 151
Query: 450 LAHTGICRSSLRRWPYDVPNC 512
+ C ++ +P+D +C
Sbjct: 152 AIYKSSCEINVEYFPFDEQSC 172
Score = 21.0 bits (42), Expect = 7.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 487 RRSDDRHIPVCAR*GTQVTVPSLANKHVV 401
R D RHIP + ++ TVP + V+
Sbjct: 420 REDDARHIPHASVTDSENTVPRYLSPDVI 448
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 64.5 bits (150), Expect = 6e-13
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Frame = +3
Query: 96 QLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAI-KYISFDALEETFTLHSWVALSWKDEFL 272
+L DL YN RPV + ++ VK++ + + I + + T + WV SW D L
Sbjct: 27 RLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKL 86
Query: 273 SWIPSNYGDIKEIQVESHLIWTPRMALF-NADATTAMYQSDQFYTTCLLANDGTVTCVPH 449
W P YG ++ + V S IW P + L+ NAD + T L G V P
Sbjct: 87 KWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEV----TLATKATLNYTGRVEWKPP 142
Query: 450 LAHTGICRSSLRRWPYDVPNC 512
+ C + +P+D C
Sbjct: 143 AIYKSSCEIDVEYFPFDEQTC 163
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 64.5 bits (150), Expect = 6e-13
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Frame = +3
Query: 81 SHEEAQLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAI-KYISFDALEETFTLHSWVALSW 257
SHE+ +L DL YN RPV + + + + + I D + + W+ L W
Sbjct: 22 SHEK-RLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLLITNLWLKLEW 80
Query: 258 KDEFLSWIPSNYGDIKEIQVESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVT 437
D + W S+YG ++++++ H +W P + ++N+ A + T ++ N+GT
Sbjct: 81 NDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNS-ADEGF--DGTYPTNVVVKNNGTCL 137
Query: 438 CVPHLAHTGICRSSLRRWPYDVPNC 512
VP C+ + +P+D C
Sbjct: 138 YVPPGIFKSTCKIDITWFPFDDQRC 162
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 63.3 bits (147), Expect = 1e-12
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = +3
Query: 138 RPVKDHKSSVNVKVRFAIKYI-SFDALEETFTLHSWVALSWKDEFLSWIPSNYGDIKEIQ 314
RPV + + VK ++ I D + T ++W+ L W D L W S YG +K+++
Sbjct: 3 RPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLR 62
Query: 315 VESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVPHLAHTGICRSSLRRWP 494
+ + +W P + ++N+ A + T+ ++ +DG+ VP C+ + +P
Sbjct: 63 ITPNKLWKPDILMYNS-ADEGF--DGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFP 119
Query: 495 YDVPNC 512
+D +C
Sbjct: 120 FDDQHC 125
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 62.9 bits (146), Expect = 2e-12
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = +3
Query: 138 RPVKDHKSSVNVKVRFAIKYI-SFDALEETFTLHSWVALSWKDEFLSWIPSNYGDIKEIQ 314
RPV + + VK ++ I D + T ++W+ L W D L W S YG +K+++
Sbjct: 3 RPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLR 62
Query: 315 VESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVPHLAHTGICRSSLRRWP 494
+ + +W P + ++N+ A + T+ ++ +DG+ VP C+ + +P
Sbjct: 63 ITPNKLWKPDILMYNS-ADEGF--DGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFP 119
Query: 495 YDVPNC 512
+D +C
Sbjct: 120 FDDQHC 125
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 62.9 bits (146), Expect = 2e-12
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = +3
Query: 138 RPVKDHKSSVNVKVRFAIKYI-SFDALEETFTLHSWVALSWKDEFLSWIPSNYGDIKEIQ 314
RPV + + VK ++ I D + T ++W+ L W D L W S YG +K+++
Sbjct: 3 RPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLR 62
Query: 315 VESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVPHLAHTGICRSSLRRWP 494
+ + +W P + ++N+ A + T+ ++ +DG+ VP C+ + +P
Sbjct: 63 ITPNKLWKPDILMYNS-ADEGF--DGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFP 119
Query: 495 YDVPNC 512
+D +C
Sbjct: 120 FDDQHC 125
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 62.9 bits (146), Expect = 2e-12
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = +3
Query: 138 RPVKDHKSSVNVKVRFAIKYI-SFDALEETFTLHSWVALSWKDEFLSWIPSNYGDIKEIQ 314
RPV + + VK ++ I D + T ++W+ L W D L W S YG +K+++
Sbjct: 3 RPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLR 62
Query: 315 VESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVPHLAHTGICRSSLRRWP 494
+ + +W P + ++N+ A + T+ ++ +DG+ VP C+ + +P
Sbjct: 63 ITPNKLWKPDILMYNS-ADEGF--DGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFP 119
Query: 495 YDVPNC 512
+D +C
Sbjct: 120 FDDQHC 125
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 62.9 bits (146), Expect = 2e-12
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Frame = +3
Query: 96 QLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAI-KYISFDALEETFTLHSWVALSWKDEFL 272
+L DL YN RPV + + V ++ + + I + + T + WV SW D L
Sbjct: 31 RLYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKL 90
Query: 273 SWIPSNYGDIKEIQVESHLIWTPRMALF-NADATTAMYQSDQFYTTCLLANDGTVTCVPH 449
W P YG +K + V S IW P + L+ NAD + T + + G V P
Sbjct: 91 RWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEV----TLATKATIYHQGLVEWKPP 146
Query: 450 LAHTGICRSSLRRWPYDVPNC 512
+ C + +P+D C
Sbjct: 147 AIYKSSCEIDVEYFPFDEQTC 167
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 62.5 bits (145), Expect = 2e-12
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = +3
Query: 138 RPVKDHKSSVNVKVRFAIKYI-SFDALEETFTLHSWVALSWKDEFLSWIPSNYGDIKEIQ 314
RPV + + VK ++ I D + T ++W+ L W D L W S YG +K+++
Sbjct: 3 RPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLR 62
Query: 315 VESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVPHLAHTGICRSSLRRWP 494
+ + +W P + ++N+ A + T+ ++ +DG+ VP C+ + +P
Sbjct: 63 ITPNKLWKPDILMYNS-ADEGF--DGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFP 119
Query: 495 YDVPNC 512
+D +C
Sbjct: 120 FDDQHC 125
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 60.9 bits (141), Expect = 8e-12
Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = +3
Query: 138 RPVKDHKSSVNVKVRFAIKYI-SFDALEETFTLHSWVALSWKDEFLSWIPSNYGDIKEIQ 314
RPV + + VK ++ I D + T ++W+ L W D L W S YG +K+++
Sbjct: 3 RPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLR 62
Query: 315 VESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVPHLAHTGICRSSLRRWP 494
+ + +W P + ++N+ A + T+ ++ ++G+ VP C+ + +P
Sbjct: 63 ITPNKLWKPDILMYNS-ADEGF--DGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFP 119
Query: 495 YDVPNC 512
+D +C
Sbjct: 120 FDDQHC 125
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 58.8 bits (136), Expect = 3e-11
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Frame = +3
Query: 90 EAQLQKDLFCAYNYEFRPVKDHKSSVNVKVRFAIKYI-SFDALEETFTLHSWVALSWKDE 266
E +L K L Y+ RP ++ + V ++ +I D + T + WV W D
Sbjct: 6 EYRLTKYLLDGYDAGVRPAENSSQPLAVVFGLSLHHIIDVDEKNQILTTNCWVTQIWTDH 65
Query: 267 FLSWIPSNYGDIKEIQVESHLIWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVP 446
L W S + I+ I+V + +W P L+N Y S T ++++ G V +
Sbjct: 66 HLKWNASEFAGIRVIRVPYNRVWRPDTILYN--NADPQYSSAVINTNVIVSHTGEVVWLS 123
Query: 447 HLAHTGICRSSLRRWPYDVPNC 512
H C + +P+D C
Sbjct: 124 HGIFRSSCDIDVEFFPFDEQRC 145
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.3 bits (85), Expect = 5e-05
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Frame = +3
Query: 201 SFDALEET---FTLHSWVALSWKDEFLSWIPSNYGDIKEIQVE-SHLIWTPRMALFNADA 368
SFDA+ E +T+ ++ WKDE L++ S ++ + + + IW P F D
Sbjct: 71 SFDAISEVNMDYTITMYLNQYWKDERLAF--SQEEEVLTLSGDFAEKIWVPD-TFFANDK 127
Query: 369 TTAMYQSDQFYTTCLLANDGTVTCVPHLAHTGICRSSLRRWPYDVPNC 512
+ ++ + L+ DG+VT T C L +P D NC
Sbjct: 128 NSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNC 175
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/30 (23%), Positives = 16/30 (53%)
Frame = +1
Query: 364 MPQLQCINRTNSIRRVY*PTTVLLLAFLIW 453
MP+++ +N + R+ P + +L + W
Sbjct: 455 MPKIKDVNIIDKYSRIIFPVSFMLFNAIYW 484
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 28.7 bits (61), Expect = 0.037
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 6/135 (4%)
Frame = +3
Query: 126 NYEFRPVKDHKSSVNVKVRFAIKYISFDALEET---FTLHSWVALSWKDEFLSWIPSNYG 296
NYE + H V+ I S + E +++ + SW+D LS++ G
Sbjct: 47 NYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFL----G 102
Query: 297 DIKEIQVESHL---IWTPRMALFNADATTAMYQSDQFYTTCLLANDGTVTCVPHLAHTGI 467
IK + + + IW P +N + ++ ++ DG + L
Sbjct: 103 PIKSLSLSIKMLERIWRPDTYFYNGKHSY-VHTITVPNKLLRISQDGDILYSMRLTIKAK 161
Query: 468 CRSSLRRWPYDVPNC 512
C LR +P D +C
Sbjct: 162 CPMELRNFPMDRQSC 176
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,487
Number of Sequences: 438
Number of extensions: 3113
Number of successful extensions: 35
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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