Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_K21
         (496 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82057-3|CAB04860.2|  303|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z73899-8|CAA98079.2|  669|Caenorhabditis elegans Hypothetical pr...    27   5.7  

>Z82057-3|CAB04860.2|  303|Caenorhabditis elegans Hypothetical
           protein T26H8.2 protein.
          Length = 303

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 248 FDKSFNLPYHDRLGHIFIVTKLEIQIF*KTCISLVRF 138
           FD  F   Y   +GHI I+T  E+  +   CISL RF
Sbjct: 70  FDLKFLKSYSYIVGHILIIT-YEVSTYSHLCISLNRF 105


>Z73899-8|CAA98079.2|  669|Caenorhabditis elegans Hypothetical
           protein ZK829.10 protein.
          Length = 669

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 1   DLRWWYFVFFLNSFRFIFITTASFNIEYEIHIRKW 105
           DL ++YF   +  F   F+  + F   Y  +++ W
Sbjct: 518 DLEYYYFYDLIQFFILFFVIVSPFGFAYYSYLKMW 552


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,464,240
Number of Sequences: 27780
Number of extensions: 199066
Number of successful extensions: 437
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)