Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_K17
         (340 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.25 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   2.3  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   4.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   5.4  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    20   7.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    20   7.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 40  IVDPRCCRIRHEALQDSDHIAGLQRRV 120
           + +P  CR RHE ++ +D I G Q  V
Sbjct: 516 VYEPSACRPRHE-IRSTDVIPGTQEHV 541


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 13  ELHAVGRSRIVDPRCCRIRHEALQDSDHIAGLQRRVGRSSIRLSLSPRGNPALVSRFP 186
           EL  V   +IV+      R +A +  +  + L + +  +S++L+  PR NP   S+ P
Sbjct: 9   ELLRVKDEKIVELEALLCRRDA-EIQELRSHLDKFLQCASLKLAFEPRRNPGPGSKGP 65


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +2

Query: 62  GFG-TRLFKTPTTSLDFNAGLEEVRYA 139
           G G T +    T SLD    L +VRYA
Sbjct: 278 GLGITTVLTLSTISLDSRTDLPKVRYA 304


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 76  PRAESCSTGDPLF*SAPPRGAPAL 5
           PR  SC T    F  AP +  P+L
Sbjct: 655 PRPISCHTTPDSFIEAPNKTLPSL 678


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 100 RCGRSLEEPRAESCST 53
           RCGRSLE      C T
Sbjct: 109 RCGRSLEGYPFNPCLT 124


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 100 RCGRSLEEPRAESCST 53
           RCGRSLE      C T
Sbjct: 125 RCGRSLEGYPFNPCLT 140


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,973
Number of Sequences: 438
Number of extensions: 1416
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)