Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_K13
         (367 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY669394-1|AAU05399.1|  487|Caenorhabditis elegans aromatic L-am...    29   1.0  
AY669393-1|AAU05398.1|  478|Caenorhabditis elegans aromatic L-am...    29   1.0  
AF047651-8|AAV58886.1|  514|Caenorhabditis elegans Biogenic amin...    29   1.0  
AF047651-7|AAC02721.2|  523|Caenorhabditis elegans Biogenic amin...    29   1.0  
AY669392-1|AAU05397.1|  158|Caenorhabditis elegans truncated aro...    28   1.8  
AY669391-1|AAU05396.1|  158|Caenorhabditis elegans truncated aro...    28   1.8  

>AY669394-1|AAU05399.1|  487|Caenorhabditis elegans aromatic L-amino
           acid decarboxylase protein.
          Length = 487

 Score = 29.1 bits (62), Expect = 1.0
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -2

Query: 105 PTTGERVVVSLGWIIGMIEIDERRSSDRSGPGC 7
           P+  E  + SL W++ ++ + E   +  +GPGC
Sbjct: 109 PSMTELEMSSLDWVVDLMGLPEHFKNSHNGPGC 141


>AY669393-1|AAU05398.1|  478|Caenorhabditis elegans aromatic L-amino
           acid decarboxylase protein.
          Length = 478

 Score = 29.1 bits (62), Expect = 1.0
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -2

Query: 105 PTTGERVVVSLGWIIGMIEIDERRSSDRSGPGC 7
           P+  E  + SL W++ ++ + E   +  +GPGC
Sbjct: 109 PSMTELEMSSLDWVVDLMGLPEHFKNSHNGPGC 141


>AF047651-8|AAV58886.1|  514|Caenorhabditis elegans Biogenic amine
           synthesis relatedprotein 1, isoform a protein.
          Length = 514

 Score = 29.1 bits (62), Expect = 1.0
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -2

Query: 105 PTTGERVVVSLGWIIGMIEIDERRSSDRSGPGC 7
           P+  E  + SL W++ ++ + E   +  +GPGC
Sbjct: 109 PSMTELEMSSLDWVVDLMGLPEHFKNSHNGPGC 141


>AF047651-7|AAC02721.2|  523|Caenorhabditis elegans Biogenic amine
           synthesis relatedprotein 1, isoform b protein.
          Length = 523

 Score = 29.1 bits (62), Expect = 1.0
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -2

Query: 105 PTTGERVVVSLGWIIGMIEIDERRSSDRSGPGC 7
           P+  E  + SL W++ ++ + E   +  +GPGC
Sbjct: 109 PSMTELEMSSLDWVVDLMGLPEHFKNSHNGPGC 141


>AY669392-1|AAU05397.1|  158|Caenorhabditis elegans truncated
           aromatic L-amino aciddecarboxylase protein.
          Length = 158

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -2

Query: 138 LKSLIFMRHLLPTTGERVVVSLGWIIGMIEIDERRSSDRSGPGC 7
           L S+ F     P+  E   V L W++ ++ + E   +   GPGC
Sbjct: 98  LSSVGFSWMACPSITELEKVMLDWVVTLMGLPEHFKNSHPGPGC 141


>AY669391-1|AAU05396.1|  158|Caenorhabditis elegans truncated
           aromatic L-amino aciddecarboxylase protein.
          Length = 158

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -2

Query: 138 LKSLIFMRHLLPTTGERVVVSLGWIIGMIEIDERRSSDRSGPGC 7
           L S+ F     P+  E   V L W++ ++ + E   +   GPGC
Sbjct: 98  LSSVGFSWMACPSITELEKVMLDWVVTLMGLPEHFKNSHPGPGC 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,157,132
Number of Sequences: 27780
Number of extensions: 75763
Number of successful extensions: 214
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)