Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_K08
         (338 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    29   0.85 
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    29   0.85 
Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical pr...    27   2.6  
U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical pr...    27   2.6  
U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical pr...    27   2.6  
AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical ...    27   3.4  
Z83111-4|CAB05535.2|  498|Caenorhabditis elegans Hypothetical pr...    26   6.0  

>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 0.85
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 217 GVKVPFAGNDKNIVSAIGSLDLTNRQ 294
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 0.85
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 217 GVKVPFAGNDKNIVSAIGSLDLTNRQ 294
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical
           protein T12G3.1 protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = -1

Query: 329 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 156
           +SATPAV AP+  + V    PI  T+ +       L P    P E++  V AP +   + 
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588

Query: 155 ELVNSSGSS 129
           E ++S   S
Sbjct: 589 ENISSDFES 597


>U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical
           protein F56D2.6b protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 113 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 253
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical
           protein F56D2.6a protein.
          Length = 739

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 113 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 253
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical
           protein Y51H7C.6a protein.
          Length = 801

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 85  RYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGAL 186
           R L+ +EP+ +  +Y+   LLTSS + R    +L
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSL 704


>Z83111-4|CAB05535.2|  498|Caenorhabditis elegans Hypothetical
           protein F57G8.5 protein.
          Length = 498

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 13  FQYTNMFGKIVFLLLVALCVGVQSRYLIVSEPVYYIQHYEEPE 141
           F ++ +  KIV L +  +C+G+  R L+V    ++  H+   E
Sbjct: 351 FDFSTLSWKIVLLCISVICIGLIVRALLVMLTTHF-SHFNVKE 392


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,078,425
Number of Sequences: 27780
Number of extensions: 124952
Number of successful extensions: 354
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)