Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_K07
(505 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK001208-1|BAA91554.1| 263|Homo sapiens protein ( Homo sapiens ... 29 7.0
U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Fac... 29 9.2
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 29 9.2
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 29 9.2
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 29 9.2
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 29 9.2
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 29 9.2
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 29 9.2
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 29 9.2
BC064947-1|AAH64947.1| 735|Homo sapiens SMPD4 protein protein. 29 9.2
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 29 9.2
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 29 9.2
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 29 9.2
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 29 9.2
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 29 9.2
AK000763-1|BAA91368.1| 605|Homo sapiens protein ( Homo sapiens ... 29 9.2
AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein. 29 9.2
AB037839-1|BAA92656.1| 889|Homo sapiens KIAA1418 protein protein. 29 9.2
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 29 9.2
>AK001208-1|BAA91554.1| 263|Homo sapiens protein ( Homo sapiens
cDNA FLJ10346 fis, clone NT2RM2001004. ).
Length = 263
Score = 29.5 bits (63), Expect = 7.0
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 303 PVW*SLQTLHRERQSSHPEQQHPGHRES*VPDRRALRVKHATKLLSPEWITYR 461
PVW L + R+ S P+Q HP H + P LR + KL + YR
Sbjct: 76 PVWLCLSPVPRQLGGSIPKQMHPAHDGT--PGTPILRTLQSFKLELAGFCLYR 126
>U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Factor
protein.
Length = 228
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BC064947-1|AAH64947.1| 735|Homo sapiens SMPD4 protein protein.
Length = 735
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +3
Query: 195 WTQQWKIKWVYRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQH 368
W + ++ +Y+++ + +++ H SV P SLQ LH ++S P ++H
Sbjct: 178 WLHHYSLE-MYQKMQSPHAKLEVLHYRLSVSSALYSPAQPSLQALHAYQESFTPTEEH 234
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>AK000763-1|BAA91368.1| 605|Homo sapiens protein ( Homo sapiens
cDNA FLJ20756 fis, clone HEP01556. ).
Length = 605
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +3
Query: 195 WTQQWKIKWVYRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQH 368
W + ++ +Y+++ + +++ H SV P SLQ LH ++S P ++H
Sbjct: 2 WLHHYSLE-MYQKMQSPHAKLEVLHYRLSVSSALYSPAQPSLQALHAYQESFTPTEEH 58
>AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein.
Length = 228
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
>AB037839-1|BAA92656.1| 889|Homo sapiens KIAA1418 protein protein.
Length = 889
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +3
Query: 195 WTQQWKIKWVYRRLMNKQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQH 368
W + ++ +Y+++ + +++ H SV P SLQ LH ++S P ++H
Sbjct: 332 WLHHYSLE-MYQKMQSPHAKLEVLHYRLSVSSALYSPAQPSLQALHAYQESFTPTEEH 388
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 413 CQTCNKTVVTRVDYVPNNRTHIISGALCVI 502
C +CNK +V+++ Y T + G+LC++
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,757,383
Number of Sequences: 237096
Number of extensions: 1203618
Number of successful extensions: 2700
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2700
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -