Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_K04
         (362 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093660-1|AAH93660.1|  931|Homo sapiens transient receptor pote...    28   7.8  
BC093658-1|AAH93658.1|  931|Homo sapiens transient receptor pote...    28   7.8  
AJ271068-1|CAC01686.1|  876|Homo sapiens transient receptor pote...    28   7.8  
AJ271067-1|CAC01685.1|  815|Homo sapiens transient receptor pote...    28   7.8  
AJ271066-1|CAC01684.1|  931|Homo sapiens transient receptor pote...    28   7.8  
AJ006276-1|CAA06943.1|  931|Homo sapiens transient receptor pote...    28   7.8  
AF080394-1|AAC63289.2|  931|Homo sapiens transient receptor pote...    28   7.8  

>BC093660-1|AAH93660.1|  931|Homo sapiens transient receptor
           potential cation channel, subfamily C, member 6 protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
 Frame = -1

Query: 188 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKTSDVVGVLKRFSFPPRE 51
           K  E +KL +LGSHEDL       K V +  QP++++S+    L  F+ PPR+
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854


>BC093658-1|AAH93658.1|  931|Homo sapiens transient receptor
           potential cation channel, subfamily C, member 6 protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
 Frame = -1

Query: 188 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKTSDVVGVLKRFSFPPRE 51
           K  E +KL +LGSHEDL       K V +  QP++++S+    L  F+ PPR+
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854


>AJ271068-1|CAC01686.1|  876|Homo sapiens transient receptor
           potential channel 6, variant delta377-431 protein.
          Length = 876

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
 Frame = -1

Query: 188 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKTSDVVGVLKRFSFPPRE 51
           K  E +KL +LGSHEDL       K V +  QP++++S+    L  F+ PPR+
Sbjct: 748 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 799


>AJ271067-1|CAC01685.1|  815|Homo sapiens transient receptor
           potential channel 6, variant delta316-431 protein.
          Length = 815

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
 Frame = -1

Query: 188 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKTSDVVGVLKRFSFPPRE 51
           K  E +KL +LGSHEDL       K V +  QP++++S+    L  F+ PPR+
Sbjct: 687 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 738


>AJ271066-1|CAC01684.1|  931|Homo sapiens transient receptor
           potential channel 6 protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
 Frame = -1

Query: 188 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKTSDVVGVLKRFSFPPRE 51
           K  E +KL +LGSHEDL       K V +  QP++++S+    L  F+ PPR+
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854


>AJ006276-1|CAA06943.1|  931|Homo sapiens transient receptor
           potential protein protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
 Frame = -1

Query: 188 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKTSDVVGVLKRFSFPPRE 51
           K  E +KL +LGSHEDL       K V +  QP++++S+    L  F+ PPR+
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854


>AF080394-1|AAC63289.2|  931|Homo sapiens transient receptor
           potential protein 6 protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
 Frame = -1

Query: 188 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKTSDVVGVLKRFSFPPRE 51
           K  E +KL +LGSHEDL       K V +  QP++++S+    L  F+ PPR+
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,582,374
Number of Sequences: 237096
Number of extensions: 581366
Number of successful extensions: 1008
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)