Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_K01
         (599 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592     29   2.2  
02_05_1025 + 33588053-33589998,33590357-33590630,33591031-33591354     29   2.8  
10_07_0045 + 12328388-12328419,12328504-12328645,12328862-123290...    29   3.8  
07_03_0908 + 22507565-22507810,22507925-22508872,22509314-225103...    28   6.6  
02_04_0509 - 23554609-23555241,23555371-23556318                       28   6.6  
03_05_0006 + 19527479-19528769,19529693-19530105,19530220-195304...    27   8.7  

>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
          Length = 853

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 452 TETGPHSAMVRTKLATG*AGGFTHYGRRIEFYIKILNIHRKQYLKLEIK 598
           T T P +       A G  GG   Y R  +  +  L+ H K+Y  LE K
Sbjct: 671 TATNPSTNTAAATAAGGGGGGRQQYPRSYQMMVSFLSKHVKRYQSLEDK 719


>02_05_1025 + 33588053-33589998,33590357-33590630,33591031-33591354
          Length = 847

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = +1

Query: 115 NYEELSPLNNINSYEQLYDSVVVGDYKAAVMKTLRLENDGXGEVINLVVNRLLSEGKRNI 294
           N+  LS  + + SY +  + +++ DY   VM    ++     EVI+ V+NRL  + K  +
Sbjct: 559 NFRRLSVDHIVPSYRKSDNRLILLDYDGTVMPEGSIDKAPSNEVIS-VLNRLCEDPKNRV 617


>10_07_0045 +
           12328388-12328419,12328504-12328645,12328862-12329054,
           12329224-12329320,12329404-12329528,12329616-12329734,
           12331225-12331298,12331359-12331413,12331450-12331500,
           12331611-12331857,12331940-12332036,12332170-12332244,
           12334286-12334488,12334757-12334905,12334995-12335168,
           12335276-12335401,12335493-12335623,12335743-12335818,
           12335898-12336027,12336115-12336193,12336267-12336465,
           12336591-12336698,12336769-12337025,12337267-12337282
          Length = 984

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 462 PVSVIVHTQLKLKSQFISLVNN 397
           P  +IVH + K++SQF  ++NN
Sbjct: 93  PTEMIVHLRFKIRSQFCMILNN 114


>07_03_0908 +
           22507565-22507810,22507925-22508872,22509314-22510337,
           22510425-22510477
          Length = 756

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -1

Query: 368 LNSFGK*SWTMFVPNMFHSL*AYSTMFLLPSE 273
           LN+ GK   T FVPN  H L   STM +L ++
Sbjct: 183 LNTNGKYRLTEFVPNHNHQLATASTMHMLKAK 214


>02_04_0509 - 23554609-23555241,23555371-23556318
          Length = 526

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +1

Query: 385 DPVLIINKRDELALKL*LSMDNDGDRASFGDGADKTSHRVSWRIYPLWEKNRVLH 549
           D +L I K D L + L            FG G+D +SH V W +  L      +H
Sbjct: 291 DTLLRIQKEDNLDVPLTTGNIKAVLLDIFGAGSDTSSHMVQWVLSELMRNPEAMH 345


>03_05_0006 +
           19527479-19528769,19529693-19530105,19530220-19530430,
           19530531-19530768,19530847-19530997,19531240-19531542
          Length = 868

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 448 NDGDRASFGDGADKTSHRVSWRIYPLWEKNRV 543
           N+G    FG      S   +W I P W++N V
Sbjct: 481 NNGQVTPFGQRNHTASALNNWEITPFWQRNHV 512


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,533,381
Number of Sequences: 37544
Number of extensions: 266837
Number of successful extensions: 591
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)