Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_K01
(599 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 24 0.99
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 1.3
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 23 2.3
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 5.3
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 7.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.2
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 21 9.2
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.2 bits (50), Expect = 0.99
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 79 LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 177
++ LSN + NY + NN N+Y++LY ++
Sbjct: 82 ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 79 LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 177
++ LSN + NY + NN N+Y++LY ++
Sbjct: 82 ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 79 LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 177
++ LSN + NY + NN N+Y++LY ++
Sbjct: 82 ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 79 LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 177
++ LSN + NY + NN N+Y++LY ++
Sbjct: 82 ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 79 LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 177
++ LSN + NY + NN N+Y++LY ++
Sbjct: 82 ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 79 LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 177
++ LSN + NY + NN N+Y++LY ++
Sbjct: 82 ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 79 LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 177
++ LSN + NY + NN N+Y++LY ++
Sbjct: 82 ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 79 LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 177
++ LSN + NY + NN N+Y++LY ++
Sbjct: 82 VSSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 171 QCSCRRLQGCSNE 209
QCSC + GCS E
Sbjct: 84 QCSCNKCIGCSAE 96
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.8 bits (44), Expect = 5.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 289 NIVEYAYKLWNMFGTNIVQDHFPKEFRMFLNEDPVLIINK 408
++ E L N F T + Q+ PK FL + PV +IN+
Sbjct: 126 DVTERDNHLVNAFKT-LTQE--PKNTNKFLEKGPVALINE 162
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 7.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 63 GDASVPYTSKQPHGC 107
G++ V T++ PHGC
Sbjct: 267 GESEVFDTTRYPHGC 281
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 139 NNINSYEQLYDSVV 180
NN N+Y++LY +++
Sbjct: 344 NNYNNYKKLYYNII 357
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.0 bits (42), Expect = 9.2
Identities = 5/12 (41%), Positives = 11/12 (91%)
Frame = -3
Query: 147 DVIEWRKLFVVN 112
+V++W+K+F +N
Sbjct: 104 EVLDWKKIFDIN 115
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,553
Number of Sequences: 438
Number of extensions: 2888
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -