Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_J13
         (682 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF399512-1|AAK94997.1|  215|Homo sapiens olfactory receptor prot...    30   8.8  
AB065833-1|BAC06052.1|  309|Homo sapiens seven transmembrane hel...    30   8.8  

>AF399512-1|AAK94997.1|  215|Homo sapiens olfactory receptor
           protein.
          Length = 215

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = +2

Query: 452 LSVLFST*SPIVHLSLTV*--FTFIVT*IXXXXXXXXXXXXXXSCGAHLFSSGMKFTGIN 625
           ++V FS    I+  SLTV   +TFI++ I              +C +HL + GM F G  
Sbjct: 129 MTVFFSAGFNIIVTSLTVLVSYTFILSSILGISTTEGRSKAFSTCSSHLAAVGM-FYGST 187

Query: 626 CYMITSAFILIALSGSN 676
            +M      + +L+  N
Sbjct: 188 AFMYLKPSTISSLTQEN 204


>AB065833-1|BAC06052.1|  309|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 309

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = +2

Query: 452 LSVLFST*SPIVHLSLTV*--FTFIVT*IXXXXXXXXXXXXXXSCGAHLFSSGMKFTGIN 625
           ++V FS    I+  SLTV   +TFI++ I              +C +HL + GM F G  
Sbjct: 196 MTVFFSAGFNIIVTSLTVLVSYTFILSSILGISTTEGRSKAFSTCSSHLAAVGM-FYGST 254

Query: 626 CYMITSAFILIALSGSN 676
            +M      + +L+  N
Sbjct: 255 AFMYLKPSTISSLTQEN 271


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,452,838
Number of Sequences: 237096
Number of extensions: 1518097
Number of successful extensions: 1937
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1937
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)