Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_J13
         (682 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   0.88 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   4.7  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   6.2  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 433 LLVTRDVVGFVLNIVADCPFIIDSVIYFYSYINFTFLIGLYGLF 564
           L V + V    +NI  D   I+DS     + +N++ +I L  +F
Sbjct: 539 LTVNQTVNPVAINIPGDTSIIVDSSTSGATIVNYSIMIFLSAVF 582


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 176 YFLYITLNFKTITNAISREMPAKLHNMRYKN 268
           YFL+   NF+T T  + +++       R  N
Sbjct: 223 YFLFGDFNFRTDTAGVIKKLTEDTQERRLSN 253


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 575 SCGAHLFSSGMKFTGINCYM 634
           SC   +F S M+F  +N YM
Sbjct: 282 SCSVFVFLSLMEFAVVNNYM 301


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,193
Number of Sequences: 438
Number of extensions: 3088
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)