SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_J12
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047733-1|AAH47733.1|  391|Homo sapiens tRNA aspartic acid meth...   185   7e-47
CR450316-1|CAG29312.1|  391|Homo sapiens DNMT2 protein.               183   3e-46
AL133415-5|CAB87964.1|  391|Homo sapiens tRNA aspartic acid meth...   183   3e-46
AJ223333-1|CAA11272.1|  391|Homo sapiens DNA methyltransferase p...   183   3e-46
AF012128-1|AAC51939.1|  391|Homo sapiens putative DNA methyltran...   183   3e-46
AF045888-1|AAC39764.1|  391|Homo sapiens putative DNA cytosine m...   182   5e-46
AF329940-1|AAK68034.1|  137|Homo sapiens DNA methyltransferase 2...   121   1e-27
AL133415-2|CAI39483.1|  134|Homo sapiens tRNA aspartic acid meth...   120   4e-27
AF329941-1|AAK68035.1|  115|Homo sapiens DNA methyltransferase 2...    81   2e-15
AL133415-3|CAI39482.1|  112|Homo sapiens tRNA aspartic acid meth...    79   7e-15
BX537961-1|CAD97925.1|   69|Homo sapiens hypothetical protein pr...    69   1e-11
AF329944-1|AAK68033.1|   89|Homo sapiens DNA methyltransferase 2...    48   2e-05
AF329943-1|AAK68037.1|   53|Homo sapiens DNA methyltransferase 2...    48   2e-05
AF329942-1|AAK68036.1|   45|Homo sapiens DNA methyltransferase 2...    48   2e-05
AL133415-4|CAI39484.1|   86|Homo sapiens tRNA aspartic acid meth...    46   6e-05
BC146651-1|AAI46652.1|  932|Homo sapiens protocadherin gamma sub...    29   7.1  
BC109240-1|AAI09241.1|  269|Homo sapiens PCDHGA6 protein protein.      29   7.1  
AF152513-1|AAD43773.1|  818|Homo sapiens protocadherin gamma A6 ...    29   7.1  
AF152326-1|AAD43720.1|  932|Homo sapiens protocadherin gamma A6 ...    29   7.1  
AB209178-1|BAD92415.1|  950|Homo sapiens protocadherin gamma sub...    29   7.1  

>BC047733-1|AAH47733.1|  391|Homo sapiens tRNA aspartic acid
           methyltransferase 1 protein.
          Length = 391

 Score =  185 bits (451), Expect = 7e-47
 Identities = 87/161 (54%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
 Frame = +2

Query: 23  RILELYSGIGGMICAWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQE 202
           R+LELYSG+GGM  A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+ +T +E
Sbjct: 5   RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEE 64

Query: 203 IKKLRVNTILMSPPCQPFTRNGKYLDENDPRTNSFLYLIGIMDQLNEV-EYILMENVKGF 379
             +L  + ILMSPPCQPFTR G+  D  D RTNSFLY++ I+ +L ++ +YIL+ENVKGF
Sbjct: 65  FDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGF 124

Query: 380 EHSTVRNIFIDQLIQCDFTYQEFLLCPTSVGVPNSKAKVLL 502
           E S+ R++ I  +  C F YQEFLL PTS+G+PNS+ +  L
Sbjct: 125 EVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFL 165


>CR450316-1|CAG29312.1|  391|Homo sapiens DNMT2 protein.
          Length = 391

 Score =  183 bits (446), Expect = 3e-46
 Identities = 86/161 (53%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
 Frame = +2

Query: 23  RILELYSGIGGMICAWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQE 202
           R+LELYSG+GGM  A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+ +T +E
Sbjct: 5   RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEE 64

Query: 203 IKKLRVNTILMSPPCQPFTRNGKYLDENDPRTNSFLYLIGIMDQLNEV-EYILMENVKGF 379
             +L  + ILMSPPCQPFTR G+  D  D RTNSFL+++ I+ +L ++ +YIL+ENVKGF
Sbjct: 65  FDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGF 124

Query: 380 EHSTVRNIFIDQLIQCDFTYQEFLLCPTSVGVPNSKAKVLL 502
           E S+ R++ I  +  C F YQEFLL PTS+G+PNS+ +  L
Sbjct: 125 EVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFL 165


>AL133415-5|CAB87964.1|  391|Homo sapiens tRNA aspartic acid
           methyltransferase 1 protein.
          Length = 391

 Score =  183 bits (446), Expect = 3e-46
 Identities = 86/161 (53%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
 Frame = +2

Query: 23  RILELYSGIGGMICAWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQE 202
           R+LELYSG+GGM  A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+ +T +E
Sbjct: 5   RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEE 64

Query: 203 IKKLRVNTILMSPPCQPFTRNGKYLDENDPRTNSFLYLIGIMDQLNEV-EYILMENVKGF 379
             +L  + ILMSPPCQPFTR G+  D  D RTNSFL+++ I+ +L ++ +YIL+ENVKGF
Sbjct: 65  FDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGF 124

Query: 380 EHSTVRNIFIDQLIQCDFTYQEFLLCPTSVGVPNSKAKVLL 502
           E S+ R++ I  +  C F YQEFLL PTS+G+PNS+ +  L
Sbjct: 125 EVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFL 165


>AJ223333-1|CAA11272.1|  391|Homo sapiens DNA methyltransferase
           protein.
          Length = 391

 Score =  183 bits (446), Expect = 3e-46
 Identities = 86/161 (53%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
 Frame = +2

Query: 23  RILELYSGIGGMICAWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQE 202
           R+LELYSG+GGM  A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+ +T +E
Sbjct: 5   RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEE 64

Query: 203 IKKLRVNTILMSPPCQPFTRNGKYLDENDPRTNSFLYLIGIMDQLNEV-EYILMENVKGF 379
             +L  + ILMSPPCQPFTR G+  D  D RTNSFL+++ I+ +L ++ +YIL+ENVKGF
Sbjct: 65  FDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGF 124

Query: 380 EHSTVRNIFIDQLIQCDFTYQEFLLCPTSVGVPNSKAKVLL 502
           E S+ R++ I  +  C F YQEFLL PTS+G+PNS+ +  L
Sbjct: 125 EVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFL 165


>AF012128-1|AAC51939.1|  391|Homo sapiens putative DNA
           methyltransferase protein.
          Length = 391

 Score =  183 bits (446), Expect = 3e-46
 Identities = 86/161 (53%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
 Frame = +2

Query: 23  RILELYSGIGGMICAWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQE 202
           R+LELYSG+GGM  A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+ +T +E
Sbjct: 5   RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEE 64

Query: 203 IKKLRVNTILMSPPCQPFTRNGKYLDENDPRTNSFLYLIGIMDQLNEV-EYILMENVKGF 379
             +L  + ILMSPPCQPFTR G+  D  D RTNSFL+++ I+ +L ++ +YIL+ENVKGF
Sbjct: 65  FDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGF 124

Query: 380 EHSTVRNIFIDQLIQCDFTYQEFLLCPTSVGVPNSKAKVLL 502
           E S+ R++ I  +  C F YQEFLL PTS+G+PNS+ +  L
Sbjct: 125 EVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFL 165


>AF045888-1|AAC39764.1|  391|Homo sapiens putative DNA cytosine
           methyltransferase DNMT2 protein.
          Length = 391

 Score =  182 bits (444), Expect = 5e-46
 Identities = 85/161 (52%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
 Frame = +2

Query: 23  RILELYSGIGGMICAWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQE 202
           R+LELYSG+GGM  A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+ +T +E
Sbjct: 5   RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEE 64

Query: 203 IKKLRVNTILMSPPCQPFTRNGKYLDENDPRTNSFLYLIGIMDQLNEV-EYILMENVKGF 379
             +L  + ILMSPPCQPFTR G+  D  D RTNSFL+++ I+ +L ++ +YIL+ENVKGF
Sbjct: 65  FDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGF 124

Query: 380 EHSTVRNIFIDQLIQCDFTYQEFLLCPTSVGVPNSKAKVLL 502
           E S+ R++ I  +  C F YQEF+L PTS+G+PNS+ +  L
Sbjct: 125 EVSSTRDLLIQTIENCGFQYQEFILSPTSLGIPNSRLRYFL 165


>AF329940-1|AAK68034.1|  137|Homo sapiens DNA methyltransferase 2b
           protein.
          Length = 137

 Score =  121 bits (292), Expect = 1e-27
 Identities = 67/146 (45%), Positives = 90/146 (61%)
 Frame = +2

Query: 65  AWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQEIKKLRVNTILMSPP 244
           A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+ +T +E  +L  + ILMSPP
Sbjct: 1   ALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPP 60

Query: 245 CQPFTRNGKYLDENDPRTNSFLYLIGIMDQLNEVEYILMENVKGFEHSTVRNIFIDQLIQ 424
           CQPFTR  K      P+                  YIL+ENVKGFE S+ R++ I  +  
Sbjct: 61  CQPFTRLQKL-----PK------------------YILLENVKGFEVSSTRDLLIQTIEN 97

Query: 425 CDFTYQEFLLCPTSVGVPNSKAKVLL 502
           C F YQEFLL PTS+G+PNS+ +  L
Sbjct: 98  CGFQYQEFLLSPTSLGIPNSRLRYFL 123


>AL133415-2|CAI39483.1|  134|Homo sapiens tRNA aspartic acid
           methyltransferase 1 protein.
          Length = 134

 Score =  120 bits (288), Expect = 4e-27
 Identities = 66/143 (46%), Positives = 88/143 (61%)
 Frame = +2

Query: 74  ESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQEIKKLRVNTILMSPPCQP 253
           ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+ +T +E  +L  + ILMSPPCQP
Sbjct: 1   ESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQP 60

Query: 254 FTRNGKYLDENDPRTNSFLYLIGIMDQLNEVEYILMENVKGFEHSTVRNIFIDQLIQCDF 433
           FTR  K      P+                  YIL+ENVKGFE S+ R++ I  +  C F
Sbjct: 61  FTRLQKL-----PK------------------YILLENVKGFEVSSTRDLLIQTIENCGF 97

Query: 434 TYQEFLLCPTSVGVPNSKAKVLL 502
            YQEFLL PTS+G+PNS+ +  L
Sbjct: 98  QYQEFLLSPTSLGIPNSRLRYFL 120


>AF329941-1|AAK68035.1|  115|Homo sapiens DNA methyltransferase 2c
           protein.
          Length = 115

 Score = 81.0 bits (191), Expect = 2e-15
 Identities = 36/67 (53%), Positives = 50/67 (74%)
 Frame = +2

Query: 65  AWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQEIKKLRVNTILMSPP 244
           A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+ +T +E  +L  + ILMSPP
Sbjct: 1   ALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPP 60

Query: 245 CQPFTRN 265
           CQPFTR+
Sbjct: 61  CQPFTRD 67



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = +2

Query: 395 RNIFIDQLIQCDFTYQEFLLCPTSVGVPNSKAKVLL 502
           R++ I  +  C F YQEFLL PTS+G+PNS+ +  L
Sbjct: 66  RDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFL 101


>AL133415-3|CAI39482.1|  112|Homo sapiens tRNA aspartic acid
           methyltransferase 1 protein.
          Length = 112

 Score = 79.4 bits (187), Expect = 7e-15
 Identities = 35/64 (54%), Positives = 48/64 (75%)
 Frame = +2

Query: 74  ESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQEIKKLRVNTILMSPPCQP 253
           ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+ +T +E  +L  + ILMSPPCQP
Sbjct: 1   ESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQP 60

Query: 254 FTRN 265
           FTR+
Sbjct: 61  FTRD 64



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = +2

Query: 395 RNIFIDQLIQCDFTYQEFLLCPTSVGVPNSKAKVLL 502
           R++ I  +  C F YQEFLL PTS+G+PNS+ +  L
Sbjct: 63  RDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFL 98


>BX537961-1|CAD97925.1|   69|Homo sapiens hypothetical protein
           protein.
          Length = 69

 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 31/54 (57%), Positives = 42/54 (77%)
 Frame = +2

Query: 23  RILELYSGIGGMICAWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQ 184
           R+LELYSG+GGM  A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+
Sbjct: 5   RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIE 58


>AF329944-1|AAK68033.1|   89|Homo sapiens DNA methyltransferase 2f
           protein.
          Length = 89

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 23/50 (46%), Positives = 33/50 (66%)
 Frame = +2

Query: 65  AWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQEIKKL 214
           A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+       +KL
Sbjct: 1   ALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIERPLDTNNRKL 50


>AF329943-1|AAK68037.1|   53|Homo sapiens DNA methyltransferase 2e
           protein.
          Length = 53

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/40 (52%), Positives = 30/40 (75%)
 Frame = +2

Query: 65  AWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQ 184
           A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+
Sbjct: 1   ALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIE 40


>AF329942-1|AAK68036.1|   45|Homo sapiens DNA methyltransferase 2d
           protein.
          Length = 45

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/40 (52%), Positives = 30/40 (75%)
 Frame = +2

Query: 65  AWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQ 184
           A +ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+
Sbjct: 1   ALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIE 40


>AL133415-4|CAI39484.1|   86|Homo sapiens tRNA aspartic acid
           methyltransferase 1 protein.
          Length = 86

 Score = 46.4 bits (105), Expect = 6e-05
 Identities = 22/47 (46%), Positives = 31/47 (65%)
 Frame = +2

Query: 74  ESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRNIQSLTPQEIKKL 214
           ES +   VVAA+D+NTVAN VY +NFP T+L+ + I+       +KL
Sbjct: 1   ESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIERPLDTNNRKL 47


>BC146651-1|AAI46652.1|  932|Homo sapiens protocadherin gamma
           subfamily A, 6 protein.
          Length = 932

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = +2

Query: 134 VYLHNFPKTKLINRNIQSLTPQEIKKLRVNTILMSPPCQPFTRNGKYLDENDPRTNSFLY 313
           V+L+N   T   ++    L+ + I  L V     +PP  P +    Y+ EN+PR  S   
Sbjct: 415 VFLYNITVTAT-DKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFS 473

Query: 314 LIGI---MDQLNEVEYILMEN 367
           +  +   +DQ  +V Y L E+
Sbjct: 474 VNALDPDVDQNAQVSYSLAED 494


>BC109240-1|AAI09241.1|  269|Homo sapiens PCDHGA6 protein protein.
          Length = 269

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = +2

Query: 134 VYLHNFPKTKLINRNIQSLTPQEIKKLRVNTILMSPPCQPFTRNGKYLDENDPRTNSFLY 313
           V+L+N   T   ++    L+ + I  L V     +PP  P +    Y+ EN+PR  S   
Sbjct: 148 VFLYNITVTAT-DKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFS 206

Query: 314 LIGI---MDQLNEVEYILMEN 367
           +  +   +DQ  +V Y L E+
Sbjct: 207 VNALDPDVDQNAQVSYSLAED 227


>AF152513-1|AAD43773.1|  818|Homo sapiens protocadherin gamma A6
           short form protein protein.
          Length = 818

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = +2

Query: 134 VYLHNFPKTKLINRNIQSLTPQEIKKLRVNTILMSPPCQPFTRNGKYLDENDPRTNSFLY 313
           V+L+N   T   ++    L+ + I  L V     +PP  P +    Y+ EN+PR  S   
Sbjct: 415 VFLYNITVTAT-DKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFS 473

Query: 314 LIGI---MDQLNEVEYILMEN 367
           +  +   +DQ  +V Y L E+
Sbjct: 474 VNALDPDVDQNAQVSYSLAED 494


>AF152326-1|AAD43720.1|  932|Homo sapiens protocadherin gamma A6
           protein.
          Length = 932

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = +2

Query: 134 VYLHNFPKTKLINRNIQSLTPQEIKKLRVNTILMSPPCQPFTRNGKYLDENDPRTNSFLY 313
           V+L+N   T   ++    L+ + I  L V     +PP  P +    Y+ EN+PR  S   
Sbjct: 415 VFLYNITVTAT-DKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFS 473

Query: 314 LIGI---MDQLNEVEYILMEN 367
           +  +   +DQ  +V Y L E+
Sbjct: 474 VNALDPDVDQNAQVSYSLAED 494


>AB209178-1|BAD92415.1|  950|Homo sapiens protocadherin gamma
           subfamily A, 6 isoform 1 precursor variant protein.
          Length = 950

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = +2

Query: 134 VYLHNFPKTKLINRNIQSLTPQEIKKLRVNTILMSPPCQPFTRNGKYLDENDPRTNSFLY 313
           V+L+N   T   ++    L+ + I  L V     +PP  P +    Y+ EN+PR  S   
Sbjct: 433 VFLYNITVTAT-DKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFS 491

Query: 314 LIGI---MDQLNEVEYILMEN 367
           +  +   +DQ  +V Y L E+
Sbjct: 492 VNALDPDVDQNAQVSYSLAED 512


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,780,679
Number of Sequences: 237096
Number of extensions: 1452042
Number of successful extensions: 2139
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2133
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -