Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_J12
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   3.2  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   4.2  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   5.6  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   5.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   7.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.7  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -1

Query: 160 CLGKIM*VNKISNCVYIDCSYDVTL*ARFFPRTNHASYTT 41
           C+G+I    + S     DC Y  T    F    NH  Y+T
Sbjct: 126 CIGRI----QWSKLQVFDCRYVTTTSGMFEALCNHIKYST 161


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 238 STVSTIYTERKIPRRKRP 291
           ST++     RK PRR RP
Sbjct: 99  STIAVCVCMRKCPRRHRP 116


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +2

Query: 65  AWKESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRN 178
           A +E   +  +++++  NT+ N  Y +N+      N N
Sbjct: 70  AERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNNNN 107


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/36 (22%), Positives = 18/36 (50%)
 Frame = +2

Query: 71  KESGLQGDVVAAVDINTVANFVYLHNFPKTKLINRN 178
           +E   +  +++++  NT+ N  Y +N+      N N
Sbjct: 72  RERSREPKIISSLSNNTIHNNNYKYNYNNNNYNNNN 107


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 47  IGGMICAWKESGLQGDVVAAVDIN 118
           IGG+   W E G+ G  ++ + +N
Sbjct: 246 IGGLNFQWGEEGIFGMSLSPIAVN 269


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +2

Query: 38  YSGIGGMICAWKESGLQGDVVAAVDINTVANFVYLHNFP 154
           +S  G +   W  SG   D++     +  +NF+ +  FP
Sbjct: 157 WSRKGFLRTRWSISGTVFDLINIHLFHDASNFIAMETFP 195


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 295 NQFILIFNRNHGPTE*G 345
           N F+L    NHGP   G
Sbjct: 890 NHFVLKMGINHGPVTAG 906


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,646
Number of Sequences: 438
Number of extensions: 3042
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)