Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_J11
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...   118   5e-29
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          57   1e-10
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          45   7e-07
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   2.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.3  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   5.7  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score =  118 bits (284), Expect = 5e-29
 Identities = 61/182 (33%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
 Frame = -3

Query: 540 QEVLLFYFNMKKPAAEAHRIILDTI-KTAISDRTCREWFQRSKSGDIGVENRHSGGREKV 364
           + +LLFYF   K A++AH+ +       A+ +R C+ WF + +SGD  +++    GR   
Sbjct: 9   RHILLFYFRKGKNASQAHKKLCAVYGDEALKERQCQNWFDKFRSGDFSLKDEKRSGRPVE 68

Query: 363 VEDTALEVILSEDSCQTQEKLSEPLGISQQ-VKTPVKQLRMI**EGY*VPHELKPRDVER 187
           V+D  ++ I+  D   T  +++E L +S   ++  +KQL  +      VPHELK + + +
Sbjct: 69  VDDDLIKAIIDSDRHSTTREIAEKLHVSHTCIENHLKQLGYVQKLDTWVPHELKEKHLTQ 128

Query: 186 RLIAEQLMERQTRKG-FPHRIVTGDKKWVHYNNPKRRKSWGLPGHTATSTPRPNIHG*KV 10
           R+ +  L++++     F  R++TGD+KWV YNN KR++SW  P   A +T +  IH  KV
Sbjct: 129 RINSCDLLKKRNENDPFLKRLITGDEKWVVYNNIKRKRSWSRPREPAQTTSKAGIHRKKV 188

Query: 9   ML 4
           +L
Sbjct: 189 LL 190


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 57.2 bits (132), Expect = 1e-10
 Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = -3

Query: 207 KPRDVERRLIAEQLMERQTRKG-FPHRIVTGDKKWVHYNNPKRRKSWGLPGHTATSTPRP 31
           K + + +R+ +  L+++++    F  R++TGD+KWV YNN KR++SW  P  +A +T + 
Sbjct: 1   KEKHLTQRINSCDLLKKRSENDPFLKRLITGDEKWVVYNNIKRKRSWSRPRESAQTTSKA 60

Query: 30  NIHG*KVML 4
            IH  KV+L
Sbjct: 61  GIHRKKVLL 69


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 44.8 bits (101), Expect = 7e-07
 Identities = 23/55 (41%), Positives = 31/55 (56%)
 Frame = -3

Query: 168 LMERQTRKGFPHRIVTGDKKWVHYNNPKRRKSWGLPGHTATSTPRPNIHG*KVML 4
           L +R     F  R +TGD+KWV  NN KR++ W  P   A +T +  IH  KV+L
Sbjct: 15  LKKRNENDPFLKRPITGDEKWV-VNNIKRKRWWSRPREPAQTTSKAGIHRKKVLL 68


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 325 LVSNSRKIIRTIGYQSASQNACETVENDLVRRILGTPRVET 203
           L  NSR  ++     +    A +T +N L++ ++ TP  ET
Sbjct: 205 LKENSRLALKPKDVSNCVLFALQTPDNVLIKELVVTPNRET 245


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 342 VILSEDSCQTQEKLSEPLGISQQVKTP 262
           +++SED  +T +  S+P G  +++  P
Sbjct: 579 LVVSEDGSETFKYSSQPYGFPERLLLP 605


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 415  LRTLEPFTTRSVTNSRFNSV*DNPVSLSRR 504
            +  L+ +T  SV    FN V   P+S  RR
Sbjct: 1044 IMNLKTYTQYSVVVQAFNKVGSGPMSEERR 1073


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 342 VILSEDSCQTQEKLSEPLGISQQVKTP 262
           +++SED  +T +  S+P G  +++  P
Sbjct: 579 LVVSEDGSETFKYSSQPYGFPERLLLP 605


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 52  SMTGQSP*FSALGIIVMYPFFVPSN 126
           S+  Q P F  +G   ++P F+P N
Sbjct: 133 SIQEQIPRFRHIGPSTLFPRFIPPN 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,543
Number of Sequences: 438
Number of extensions: 4465
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)