Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_J10
         (365 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   0.65 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.5  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   3.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   6.0  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 0.65
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 188 FVFDIANGCILWASIPIIFSNLHCSN 111
           F FD  N  IL A++  +  N HC N
Sbjct: 391 FNFDDVNFRILGANVKELIRNTHCVN 416


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 89  NSEYVFIYLSNEGLRKLSVLKPIKCSRLQYQ 181
           N+E V     N+ L+K SVL   K  RL+YQ
Sbjct: 417 NNEIVTAQFLNQ-LKKSSVLVHTKNGRLKYQ 446


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 79  KKNVYFNNIT*AHAC 35
           K NV+ NNI  A AC
Sbjct: 274 KHNVFVNNILAASAC 288


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 29  GITG-VSLCYVIKINVFLLNKNSEYVFIYLSNEGLRKLSVLKP 154
           G+ G VS C VI  N  +    + Y+F    ++ L  +S L P
Sbjct: 67  GLVGNVSTCVVIARNKSMHTATNYYLFSLAVSDLLLLISGLPP 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,284
Number of Sequences: 438
Number of extensions: 1732
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)