Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_J05
(537 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical ... 71 4e-13
AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome r... 55 4e-08
U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated p... 29 2.8
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 29 2.8
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 29 2.8
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 29 2.8
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 2.8
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 29 2.8
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 29 2.8
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 2.8
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 29 2.8
Z83235-3|CAB05771.1| 370|Caenorhabditis elegans Hypothetical pr... 27 6.5
AC006675-7|AAK84555.2| 409|Caenorhabditis elegans Hypothetical ... 27 6.5
>AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical
protein Y67H2A.6 protein.
Length = 426
Score = 71.3 bits (167), Expect = 4e-13
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Frame = +2
Query: 2 VSEHWTRLRAQEG-SPQTVIGAVIGKQKGRNIEVMNSFELVFSVXXXXXXXXXXYYNL-- 172
+SEH++R + Q+G + + V GA++G+Q GR +E +NSF L +L
Sbjct: 24 MSEHYSRTKVQQGPTVKKVFGAILGRQNGRQVEAINSFVLKMETEEMAEPVTFSTEHLLQ 83
Query: 173 KEEQFKQVFSEMDFLGWYTTGD----TPTERDI------AVHR-QICDINDCPVMLMLNP 319
+ +Q+ +VF E+ +G Y G+ TP E+ + AV + D + L LN
Sbjct: 84 RADQYLEVFPELQVIGLYCAGEDDNLTPEEKPLLSKLTNAVRNSEKAGQIDATLFLKLNS 143
Query: 320 --AGRNGEQLPVVLYESVIDVVNGRATMLLAPLTYTLAAEEAERIGVDHVARVSSGEAAL 493
AG +LP+ +E+ DV + P+ + L +EE+ER+GV+H+A++S+
Sbjct: 144 ITAGTT-RKLPLFAFEA--DVTDQEKHK---PIEWILVSEESERVGVNHIAKLSTKHGKD 197
Query: 494 NSLVA-EHLTAQRSA 535
V +H AQ +A
Sbjct: 198 GKSVGKKHAEAQDAA 212
>AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 8 protein.
Length = 362
Score = 54.8 bits (126), Expect = 4e-08
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Frame = +2
Query: 2 VSEHWTRLRAQEGSPQTVIGAVIGK-QKGRNIEVMNSFELVFSVXXXXXXX---XXXYYN 169
V +H+ R+ + S + V+G ++G +K + +++ NSF + F Y
Sbjct: 51 VVDHFNRVSKTQ-SVKRVVGVLLGSMKKDKTLDIGNSFAVPFDEDDKDKSTWFLDMDYLE 109
Query: 170 LKEEQFKQVFSEMDFLGWYTTGDTPTERDIAVHRQICDINDCPVMLMLNPAGRNGEQLPV 349
F +V ++ +GWY TG + DIA++ Q+ PV+++++ +N LP
Sbjct: 110 SMYGMFYKVAAKEKIVGWYHTGPKLHKNDIAINEQLKRFCPNPVLVIIDAEPKN-IGLPT 168
Query: 350 VLYESVIDVVNGRATML--LAPLTYTLAAEEAERIGVDHVARVSSGEAA--LNSLVAEHL 517
Y V +V + + + + AEEAE +GV+H+ R + A L+ + + L
Sbjct: 169 EAYIEVQEVHDDGTPPIKTFEHVPSDIGAEEAEEVGVEHLLRDIKDQTAGTLSQRITDQL 228
Query: 518 TAQR 529
R
Sbjct: 229 MGLR 232
>U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated
protein 44, isoform g protein.
Length = 1004
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 513 CSATKLLRAASPDDTLATWSTPILSASSAAKVYVSGANSIVALPFTTSITDSYNTTGSCS 334
C L ASP++ AT TP+ A YVS ++ + TT IT++
Sbjct: 770 CVRYLLENGASPNEQTATGQTPLSIAQRLG--YVSVVETLRTVTETTVITETTTVDERYK 827
Query: 333 PFLPAGFNINITGQS 289
P P N + +S
Sbjct: 828 PQNPEAMNETMFSES 842
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 513 CSATKLLRAASPDDTLATWSTPILSASSAAKVYVSGANSIVALPFTTSITDSYNTTGSCS 334
C L ASP++ AT TP+ A YVS ++ + TT IT++
Sbjct: 770 CVRYLLENGASPNEQTATGQTPLSIAQRLG--YVSVVETLRTVTETTVITETTTVDERYK 827
Query: 333 PFLPAGFNINITGQS 289
P P N + +S
Sbjct: 828 PQNPEAMNETMFSES 842
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 513 CSATKLLRAASPDDTLATWSTPILSASSAAKVYVSGANSIVALPFTTSITDSYNTTGSCS 334
C L ASP++ AT TP+ A YVS ++ + TT IT++
Sbjct: 770 CVRYLLENGASPNEQTATGQTPLSIAQRLG--YVSVVETLRTVTETTVITETTTVDERYK 827
Query: 333 PFLPAGFNINITGQS 289
P P N + +S
Sbjct: 828 PQNPEAMNETMFSES 842
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 513 CSATKLLRAASPDDTLATWSTPILSASSAAKVYVSGANSIVALPFTTSITDSYNTTGSCS 334
C L ASP++ AT TP+ A YVS ++ + TT IT++
Sbjct: 770 CVRYLLENGASPNEQTATGQTPLSIAQRLG--YVSVVETLRTVTETTVITETTTVDERYK 827
Query: 333 PFLPAGFNINITGQS 289
P P N + +S
Sbjct: 828 PQNPEAMNETMFSES 842
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 513 CSATKLLRAASPDDTLATWSTPILSASSAAKVYVSGANSIVALPFTTSITDSYNTTGSCS 334
C L ASP++ AT TP+ A YVS ++ + TT IT++
Sbjct: 770 CVRYLLENGASPNEQTATGQTPLSIAQRLG--YVSVVETLRTVTETTVITETTTVDERYK 827
Query: 333 PFLPAGFNINITGQS 289
P P N + +S
Sbjct: 828 PQNPEAMNETMFSES 842
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 513 CSATKLLRAASPDDTLATWSTPILSASSAAKVYVSGANSIVALPFTTSITDSYNTTGSCS 334
C L ASP++ AT TP+ A YVS ++ + TT IT++
Sbjct: 770 CVRYLLENGASPNEQTATGQTPLSIAQRLG--YVSVVETLRTVTETTVITETTTVDERYK 827
Query: 333 PFLPAGFNINITGQS 289
P P N + +S
Sbjct: 828 PQNPEAMNETMFSES 842
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 513 CSATKLLRAASPDDTLATWSTPILSASSAAKVYVSGANSIVALPFTTSITDSYNTTGSCS 334
C L ASP++ AT TP+ A YVS ++ + TT IT++
Sbjct: 770 CVRYLLENGASPNEQTATGQTPLSIAQRLG--YVSVVETLRTVTETTVITETTTVDERYK 827
Query: 333 PFLPAGFNINITGQS 289
P P N + +S
Sbjct: 828 PQNPEAMNETMFSES 842
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 513 CSATKLLRAASPDDTLATWSTPILSASSAAKVYVSGANSIVALPFTTSITDSYNTTGSCS 334
C L ASP++ AT TP+ A YVS ++ + TT IT++
Sbjct: 770 CVRYLLENGASPNEQTATGQTPLSIAQRLG--YVSVVETLRTVTETTVITETTTVDERYK 827
Query: 333 PFLPAGFNINITGQS 289
P P N + +S
Sbjct: 828 PQNPEAMNETMFSES 842
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 513 CSATKLLRAASPDDTLATWSTPILSASSAAKVYVSGANSIVALPFTTSITDSYNTTGSCS 334
C L ASP++ AT TP+ A YVS ++ + TT IT++
Sbjct: 770 CVRYLLENGASPNEQTATGQTPLSIAQRLG--YVSVVETLRTVTETTVITETTTVDERYK 827
Query: 333 PFLPAGFNINITGQS 289
P P N + +S
Sbjct: 828 PQNPEAMNETMFSES 842
>Z83235-3|CAB05771.1| 370|Caenorhabditis elegans Hypothetical
protein K10C3.4 protein.
Length = 370
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 236 DTPTERDIAVHRQICD-INDCPVMLMLNPAGRNGEQLPVVLYESVIDVV 379
D TE D+ ++ D +D +++ N G++ E++P+V E++ID++
Sbjct: 237 DYETEDDLDDVEEVDDEAHDPDGLVVKNKIGKDHEKIPLVESEAIIDMI 285
>AC006675-7|AAK84555.2| 409|Caenorhabditis elegans Hypothetical
protein M02H5.5 protein.
Length = 409
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 522 AVKCSATKLLRAASPDDTLATWSTPIL 442
+ +C+ TK+L D+ LA W T +L
Sbjct: 175 STQCNVTKILSKFGKDEVLAMWETDML 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,267,975
Number of Sequences: 27780
Number of extensions: 247419
Number of successful extensions: 736
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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