Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_J04
(624 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 107 2e-23
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 107 2e-23
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 107 2e-23
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 107 2e-23
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 107 2e-23
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 107 2e-23
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 106 3e-23
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 83 3e-16
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 83 3e-16
DQ780943-1|ABH07113.1| 910|Drosophila melanogaster prominin pro... 29 3.9
BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p pro... 29 3.9
AE013599-3867|AAM68313.1| 670|Drosophila melanogaster CG30164-P... 29 3.9
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 107 bits (256), Expect = 2e-23
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
QAL SPGSCLEDFRA PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G
Sbjct: 1700 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1759
Query: 181 LLERVSRCAVCIKNTT 228
VSRC VC+KN++
Sbjct: 1760 RQSHVSRCQVCMKNSS 1775
Score = 37.9 bits (84), Expect = 0.011
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 19 GSCLEDFRAIPFIECNGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERV 195
GSC+ F +P + C G+ C++ + N +FWLTT A+P +++ + + +
Sbjct: 1597 GSCVPRFSTLPVLSC-GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYI 1649
Query: 196 SRCAVC 213
SRC VC
Sbjct: 1650 SRCVVC 1655
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 107 bits (256), Expect = 2e-23
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
QAL SPGSCLEDFRA PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G
Sbjct: 1700 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1759
Query: 181 LLERVSRCAVCIKNTT 228
VSRC VC+KN++
Sbjct: 1760 RQSHVSRCQVCMKNSS 1775
Score = 37.9 bits (84), Expect = 0.011
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 19 GSCLEDFRAIPFIECNGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERV 195
GSC+ F +P + C G+ C++ + N +FWLTT A+P +++ + + +
Sbjct: 1597 GSCVPRFSTLPVLSC-GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYI 1649
Query: 196 SRCAVC 213
SRC VC
Sbjct: 1650 SRCVVC 1655
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 107 bits (256), Expect = 2e-23
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
QAL SPGSCLEDFRA PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G
Sbjct: 1700 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1759
Query: 181 LLERVSRCAVCIKNTT 228
VSRC VC+KN++
Sbjct: 1760 RQSHVSRCQVCMKNSS 1775
Score = 37.9 bits (84), Expect = 0.011
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 19 GSCLEDFRAIPFIECNGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERV 195
GSC+ F +P + C G+ C++ + N +FWLTT A+P +++ + + +
Sbjct: 1597 GSCVPRFSTLPVLSC-GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYI 1649
Query: 196 SRCAVC 213
SRC VC
Sbjct: 1650 SRCVVC 1655
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 107 bits (256), Expect = 2e-23
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
QAL SPGSCLEDFRA PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G
Sbjct: 1704 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1763
Query: 181 LLERVSRCAVCIKNTT 228
VSRC VC+KN++
Sbjct: 1764 RQSHVSRCQVCMKNSS 1779
Score = 45.2 bits (102), Expect = 7e-05
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSG 177
Q L SPGSC+ F +P + C G+ C++ + N +FWLTT A+P +++
Sbjct: 1595 QDLGSPGSCVPRFSTLPVLSC-GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENI 1647
Query: 178 RLLERVSRCAVC 213
+ + +SRC VC
Sbjct: 1648 EIRQYISRCVVC 1659
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 107 bits (256), Expect = 2e-23
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
QAL SPGSCLEDFRA PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G
Sbjct: 1704 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1763
Query: 181 LLERVSRCAVCIKNTT 228
VSRC VC+KN++
Sbjct: 1764 RQSHVSRCQVCMKNSS 1779
Score = 45.2 bits (102), Expect = 7e-05
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSG 177
Q L SPGSC+ F +P + C G+ C++ + N +FWLTT A+P +++
Sbjct: 1595 QDLGSPGSCVPRFSTLPVLSC-GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENI 1647
Query: 178 RLLERVSRCAVC 213
+ + +SRC VC
Sbjct: 1648 EIRQYISRCVVC 1659
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 107 bits (256), Expect = 2e-23
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
QAL SPGSCLEDFRA PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G
Sbjct: 1704 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1763
Query: 181 LLERVSRCAVCIKNTT 228
VSRC VC+KN++
Sbjct: 1764 RQSHVSRCQVCMKNSS 1779
Score = 45.2 bits (102), Expect = 7e-05
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSG 177
Q L SPGSC+ F +P + C G+ C++ + N +FWLTT A+P +++
Sbjct: 1595 QDLGSPGSCVPRFSTLPVLSC-GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENI 1647
Query: 178 RLLERVSRCAVC 213
+ + +SRC VC
Sbjct: 1648 EIRQYISRCVVC 1659
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 106 bits (254), Expect = 3e-23
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
QAL SPGSCLEDFRA PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G
Sbjct: 346 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETITSFWMYNLESSQPFERPQQQTIKAGE 405
Query: 181 LLERVSRCAVCIKNTT 228
VSRC VC+KN++
Sbjct: 406 RQSHVSRCQVCMKNSS 421
Score = 37.9 bits (84), Expect = 0.011
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 19 GSCLEDFRAIPFIECNGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERV 195
GSC+ F +P + C G+ C++ + N +FWLTT A+P +++ + + +
Sbjct: 243 GSCVPRFSTLPVLSC-GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYI 295
Query: 196 SRCAVC 213
SRC VC
Sbjct: 296 SRCVVC 301
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q L SPGSCLE+FRA P IEC+G G C+++ SFWLT IE+ QF P +QTLK+
Sbjct: 1664 QNLVSPGSCLEEFRAQPVIECHGH-GRCNYYDALASFWLTVIEEQDQFVQPRQQTLKAD- 1721
Query: 181 LLERVSRCAVC 213
++SRC VC
Sbjct: 1722 FTSKISRCTVC 1732
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q L SPGSCLE+FRA P IEC+G G C+++ SFWLT IE+ QF P +QTLK+
Sbjct: 1666 QNLVSPGSCLEEFRAQPVIECHGH-GRCNYYDALASFWLTVIEEQDQFVQPRQQTLKAD- 1723
Query: 181 LLERVSRCAVC 213
++SRC VC
Sbjct: 1724 FTSKISRCTVC 1734
>DQ780943-1|ABH07113.1| 910|Drosophila melanogaster prominin
protein.
Length = 910
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -1
Query: 282 IRGQISIWLLRTLSLFALCGVFDTNCTSGYTF*ETSRLKCLSLWHSKLLAVFD---GGQP 112
I G + +W++ + + C + ++N SG F L CL+ + VF GG
Sbjct: 467 IAGTVIVWVMLFMLMSYCCFLCESNAKSGVVFFIAVMLICLASICLTIFGVFSLAVGGNA 526
Query: 111 ETEFICK 91
E F+C+
Sbjct: 527 EV-FVCR 532
>BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p
protein.
Length = 1066
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -1
Query: 282 IRGQISIWLLRTLSLFALCGVFDTNCTSGYTF*ETSRLKCLSLWHSKLLAVFD---GGQP 112
I G + +W++ + + C + ++N SG F L CL+ + VF GG
Sbjct: 468 IAGTVIVWVMLFMLMSYCCFLCESNAKSGVVFFIAVMLICLASICLTIFGVFSLAVGGNA 527
Query: 111 ETEFICK 91
E F+C+
Sbjct: 528 EV-FVCR 533
>AE013599-3867|AAM68313.1| 670|Drosophila melanogaster CG30164-PA
protein.
Length = 670
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -1
Query: 282 IRGQISIWLLRTLSLFALCGVFDTNCTSGYTF*ETSRLKCLSLWHSKLLAVFD---GGQP 112
I G + +W++ + + C + ++N SG F L CL+ + VF GG
Sbjct: 448 IAGTVIVWVMLFMLMSYCCFLCESNAKSGVVFFIAVMLICLASICLTIFGVFSLAVGGNA 507
Query: 111 ETEFICK 91
E F+C+
Sbjct: 508 EV-FVCR 513
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,581,554
Number of Sequences: 53049
Number of extensions: 496733
Number of successful extensions: 1009
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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