Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_J04
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 125 3e-29
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 125 3e-29
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 125 3e-29
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 122 2e-28
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 122 2e-28
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 122 2e-28
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 101 4e-22
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 101 4e-22
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 99 3e-21
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 99 3e-21
U61955-9|AAC24409.3| 371|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81464-2|CAB03859.1| 249|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL031630-20|CAE17995.1| 122|Caenorhabditis elegans Hypothetical... 28 4.7
U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical p... 28 6.2
Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical pr... 27 8.2
AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L prot... 27 8.2
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 125 bits (301), Expect = 3e-29
Identities = 53/75 (70%), Positives = 63/75 (84%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q+L+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE QTLKSG
Sbjct: 1680 QSLSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGN 1739
Query: 181 LLERVSRCAVCIKNT 225
L RVSRC VC+K+T
Sbjct: 1740 LRTRVSRCQVCVKST 1754
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q L GSCL+ F +PF+ C+ + N S+WL+T E + ER+
Sbjct: 1571 QDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNDKSYWLSTSEAIPMMPVNERE------ 1624
Query: 181 LLERVSRCAVC 213
+ +SRCAVC
Sbjct: 1625 IEPYISRCAVC 1635
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 125 bits (301), Expect = 3e-29
Identities = 53/75 (70%), Positives = 63/75 (84%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q+L+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE QTLKSG
Sbjct: 1681 QSLSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGN 1740
Query: 181 LLERVSRCAVCIKNT 225
L RVSRC VC+K+T
Sbjct: 1741 LRTRVSRCQVCVKST 1755
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q L GSCL+ F +PF+ C+ + N S+WL+T E + ER+
Sbjct: 1572 QDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNDKSYWLSTSEAIPMMPVNERE------ 1625
Query: 181 LLERVSRCAVC 213
+ +SRCAVC
Sbjct: 1626 IEPYISRCAVC 1636
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 125 bits (301), Expect = 3e-29
Identities = 53/75 (70%), Positives = 63/75 (84%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q+L+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE QTLKSG
Sbjct: 183 QSLSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGN 242
Query: 181 LLERVSRCAVCIKNT 225
L RVSRC VC+K+T
Sbjct: 243 LRTRVSRCQVCVKST 257
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q L GSCL+ F +PF+ C+ + N+ S+WL+T E + ER+
Sbjct: 74 QDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNERE------ 127
Query: 181 LLERVSRCAVC 213
+ +SRCAVC
Sbjct: 128 IEPYISRCAVC 138
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 122 bits (294), Expect = 2e-28
Identities = 52/75 (69%), Positives = 62/75 (82%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q+ +SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE QTLKSG
Sbjct: 1681 QSPSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGN 1740
Query: 181 LLERVSRCAVCIKNT 225
L RVSRC VC+K+T
Sbjct: 1741 LRTRVSRCQVCVKST 1755
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q L GSCL+ F +PF+ C+ + N+ S+WL+T E + ER+
Sbjct: 1572 QDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNERE------ 1625
Query: 181 LLERVSRCAVC 213
+ +SRCAVC
Sbjct: 1626 IEPYISRCAVC 1636
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 122 bits (294), Expect = 2e-28
Identities = 52/75 (69%), Positives = 62/75 (82%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q+ +SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE QTLKSG
Sbjct: 1680 QSPSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGN 1739
Query: 181 LLERVSRCAVCIKNT 225
L RVSRC VC+K+T
Sbjct: 1740 LRTRVSRCQVCVKST 1754
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q L GSCL+ F +PF+ C+ + N+ S+WL+T E + ER+
Sbjct: 1571 QDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNERE------ 1624
Query: 181 LLERVSRCAVC 213
+ +SRCAVC
Sbjct: 1625 IEPYISRCAVC 1635
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 122 bits (294), Expect = 2e-28
Identities = 52/75 (69%), Positives = 62/75 (82%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q+ +SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE QTLKSG
Sbjct: 1717 QSPSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGN 1776
Query: 181 LLERVSRCAVCIKNT 225
L RVSRC VC+K+T
Sbjct: 1777 LRTRVSRCQVCVKST 1791
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q L GSCL+ F +PF+ C+ + N+ S+WL+T E + ER+
Sbjct: 1608 QDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNERE------ 1661
Query: 181 LLERVSRCAVC 213
+ +SRCAVC
Sbjct: 1662 IEPYISRCAVC 1672
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 101 bits (242), Expect = 4e-22
Identities = 43/74 (58%), Positives = 57/74 (77%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q+L SPGSCLE+FRA+PFIEC+G G TC+++A FWL+ ++ +QF P QTLK+G
Sbjct: 1429 QSLQSPGSCLEEFRAVPFIECHGRG-TCNYYATNHGFWLSIVDQDKQFRKPMSQTLKAGG 1487
Query: 181 LLERVSRCAVCIKN 222
L +RVSRC VC+KN
Sbjct: 1488 LKDRVSRCQVCLKN 1501
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSG 177
Q L PGSCL F +PF+ CN CH N SFWL+T E P T
Sbjct: 1318 QDLGQPGSCLSKFNTMPFMFCN-MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT---- 1372
Query: 178 RLLERVSRCAVC 213
+ +SRCAVC
Sbjct: 1373 AIRPYISRCAVC 1384
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 101 bits (242), Expect = 4e-22
Identities = 43/74 (58%), Positives = 57/74 (77%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q+L SPGSCLE+FRA+PFIEC+G G TC+++A FWL+ ++ +QF P QTLK+G
Sbjct: 1686 QSLQSPGSCLEEFRAVPFIECHGRG-TCNYYATNHGFWLSIVDQDKQFRKPMSQTLKAGG 1744
Query: 181 LLERVSRCAVCIKN 222
L +RVSRC VC+KN
Sbjct: 1745 LKDRVSRCQVCLKN 1758
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSG 177
Q L PGSCL F +PF+ CN CH N SFWL+T E P T
Sbjct: 1575 QDLGQPGSCLSKFNTMPFMFCN-MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT---- 1629
Query: 178 RLLERVSRCAVC 213
+ +SRCAVC
Sbjct: 1630 AIRPYISRCAVC 1641
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 98.7 bits (235), Expect = 3e-21
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q+L SPGSCLE+FRA+PFIEC+G G TC+++A FW + ++ +QF P QTLK+G
Sbjct: 1685 QSLQSPGSCLEEFRAVPFIECHGRG-TCNYYATNHGFWPSIVDQDKQFRKPMSQTLKAGG 1743
Query: 181 LLERVSRCAVCIKN 222
L +RVSRC VC+KN
Sbjct: 1744 LKDRVSRCQVCLKN 1757
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSG 177
Q L PGSCL F +PF+ CN CH N SFWL+T E P T
Sbjct: 1574 QDLGQPGSCLSKFNTMPFMFCN-MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT---- 1628
Query: 178 RLLERVSRCAVC 213
+ +SRCAVC
Sbjct: 1629 AIRPYISRCAVC 1640
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 98.7 bits (235), Expect = 3e-21
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR 180
Q+L SPGSCLE+FRA+PFIEC+G G TC+++A FW + ++ +QF P QTLK+G
Sbjct: 240 QSLQSPGSCLEEFRAVPFIECHGRG-TCNYYATNHGFWPSIVDQDKQFRKPMSQTLKAGG 298
Query: 181 LLERVSRCAVCIKN 222
L +RVSRC VC+KN
Sbjct: 299 LKDRVSRCQVCLKN 312
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 QALASPGSCLEDFRAIPFIECNGEGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSG 177
Q L PGSCL F +PF+ CN CH N SFWL+T E P T
Sbjct: 129 QDLGQPGSCLSKFNTMPFMFCN-MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT---- 183
Query: 178 RLLERVSRCAVC 213
+ +SRCAVC
Sbjct: 184 AIRPYISRCAVC 195
>U61955-9|AAC24409.3| 371|Caenorhabditis elegans Hypothetical
protein M03D4.6 protein.
Length = 371
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 176 DVS*NVYPDVQFVS-KTPHSANKLKVLNNQMLI*PLMQYLFKIQKKLIDHICNTLFKFLV 352
DV V P++ S ++ A K+K +N + + + + F I K+ C+++FK L
Sbjct: 158 DVFGQVMPEILLNSLRSARKARKIKPMNIVIYLCGMSESRFSIVKEEYVRNCHSVFKTLG 217
Query: 353 INYSQETTL 379
YS + T+
Sbjct: 218 EKYSPQLTI 226
>Z81464-2|CAB03859.1| 249|Caenorhabditis elegans Hypothetical
protein C08E8.3 protein.
Length = 249
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 579 YTEEKVEIIRAPFTVACKYI-FFSVRTVFNIISYVSTSNFVSCYTIL 442
++E+ +EI RAP T C I FS N I STS+F S I+
Sbjct: 32 WSEQIIEIPRAPATTNCGIISIFSSIFNLNPIHKTSTSSFTSKVLII 78
>AL031630-20|CAE17995.1| 122|Caenorhabditis elegans Hypothetical
protein Y38H6C.23 protein.
Length = 122
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 7 LASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLK--SGR 180
L PG C+ED ++ I C E C+ N + + D+QQ M Q L S R
Sbjct: 48 LCGPGKCMEDPKSTTPIRCVCE--KCYIDKNGRAVYPGESTDNQQAPMNSEQQLDRLSDR 105
Query: 181 LLERVSR 201
L++ SR
Sbjct: 106 QLQQQSR 112
>U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical
protein C27H5.6 protein.
Length = 322
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 183 ETSRLKCLSLWHSKLLAVFDGGQPETEFICKVMASTTFTVTFYKWYRS 40
+TS +C++ + + +F G P T F C + V WYRS
Sbjct: 84 DTSSSQCMTAYLWPVFLLFGGQLPAT-FHCLLTVERVLAVNRVSWYRS 130
>Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical
protein C52E4.6a protein.
Length = 480
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 546 PFTVACKYIFFSVRTVFNIISYVST 472
P T+AC IF + RTV N I+ ST
Sbjct: 278 PETIACACIFLAARTVENPIALPST 302
>AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L
protein.
Length = 480
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 546 PFTVACKYIFFSVRTVFNIISYVST 472
P T+AC IF + RTV N I+ ST
Sbjct: 278 PETIACACIFLAARTVENPIALPST 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,551,521
Number of Sequences: 27780
Number of extensions: 275128
Number of successful extensions: 725
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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