Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_J02
         (431 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical pr...   175   1e-44
AC024214-8|AAF36070.2|  296|Caenorhabditis elegans Hypothetical ...    30   0.62 
Z77652-2|CAB01113.1|  665|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z48582-3|CAA88464.1|  401|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p...    27   4.4  
AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical ...    27   5.8  
AL034488-17|CAA22459.2|  316|Caenorhabditis elegans Hypothetical...    27   7.7  
AL034488-16|CAN99708.1|  317|Caenorhabditis elegans Hypothetical...    27   7.7  
AF098506-1|ABN43085.1|  145|Caenorhabditis elegans Hypothetical ...    27   7.7  

>Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical
           protein ZC434.2 protein.
          Length = 194

 Score =  175 bits (426), Expect = 1e-44
 Identities = 84/144 (58%), Positives = 111/144 (77%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3   KILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 182
           K+LK+        E  +SQAL++LETN D+++QL+ELYI   KE+EL NK +IIIYVP+P
Sbjct: 7   KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66

Query: 183 KLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRV-ANKQKRPRSRTLTSVY 359
           +LKAF KI   LVRELEKKF G+ ++ +  R+ILPKP   ++    KQKRPRSRTLT+V+
Sbjct: 67  QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126

Query: 360 DAXLEDLVFPAEIVGKRIRVKLDG 431
           DA L++LV+PAE+VG+RIRVKLDG
Sbjct: 127 DAWLDELVYPAEVVGRRIRVKLDG 150


>AC024214-8|AAF36070.2|  296|Caenorhabditis elegans Hypothetical
           protein Y77E11A.9 protein.
          Length = 296

 Score = 30.3 bits (65), Expect = 0.62
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 387 GIPDLPIXRHIQKSVSWNGAFSVCWLHVSCGWAW 286
           GIP+      +  S++W+G  + C+   +C  AW
Sbjct: 5   GIPNTTNNTQVNTSLTWDGCLTACFYSPACVMAW 38


>Z77652-2|CAB01113.1|  665|Caenorhabditis elegans Hypothetical
           protein C06B3.2 protein.
          Length = 665

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 330 AFSVCWLHVSCGWAWAGSYGH 268
           A SV W+ +SC + WAG  G+
Sbjct: 572 ALSVLWIILSCHYGWAGPIGN 592


>Z48582-3|CAA88464.1|  401|Caenorhabditis elegans Hypothetical
           protein F27E5.1 protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +3

Query: 30  PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIY--VPMPKLKAFQK 203
           PD ++ + S+ ++  + N DL  + R   I KA + E+H    ++ Y    +P + A++ 
Sbjct: 39  PDIYDPAQSEKVLWFDVNLDLPPRQRFQQIAKAYKKEIHAVFDVLNYFLTIIPGVNAWEL 98

Query: 204 IQIRLVRELEK 236
           I       L+K
Sbjct: 99  IGNMTASALDK 109


>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 20/86 (23%), Positives = 38/86 (44%)
 Frame = +3

Query: 9    LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 188
            LK  A  P++  TSI Q L+ ++  +  +    E  ++ +K+IE+H +   +        
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261

Query: 189  KAFQKIQIRLVRELEKKFSGKHVVFV 266
            +  QK  ++LV     K       F+
Sbjct: 2262 EKTQKYDLKLVATSSGKQVSSEAEFI 2287


>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 20/86 (23%), Positives = 38/86 (44%)
 Frame = +3

Query: 9    LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 188
            LK  A  P++  TSI Q L+ ++  +  +    E  ++ +K+IE+H +   +        
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261

Query: 189  KAFQKIQIRLVRELEKKFSGKHVVFV 266
            +  QK  ++LV     K       F+
Sbjct: 2262 EKTQKYDLKLVATSSGKQVSSEAEFI 2287


>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
            protein F25F2.2 protein.
          Length = 4307

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 20/86 (23%), Positives = 38/86 (44%)
 Frame = +3

Query: 9    LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 188
            LK  A  P++  TSI Q L+ ++  +  +    E  ++ +K+IE+H +   +        
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261

Query: 189  KAFQKIQIRLVRELEKKFSGKHVVFV 266
            +  QK  ++LV     K       F+
Sbjct: 2262 EKTQKYDLKLVATSSGKQVSSEAEFI 2287


>AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical
           protein T07A9.9a protein.
          Length = 681

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 300 KTRVANKQKRPRSRTLTSVYDAXLEDLVFPAE 395
           K ++  K K  RSR+L++V  A  ++L FP E
Sbjct: 599 KPQLGKKMKVGRSRSLSAVRPAPRDELAFPDE 630


>AL034488-17|CAA22459.2|  316|Caenorhabditis elegans Hypothetical
           protein Y54G11A.10b protein.
          Length = 316

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +3

Query: 132 EIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 305
           E E H K   ++   +  +K   +   +L+ E+E++F  + +        LP PS  T
Sbjct: 255 EAECHEKAVDLLKSAVGSVKLVIRYMPKLLDEMERRFERQRIRSTQQSPTLPTPSSST 312


>AL034488-16|CAN99708.1|  317|Caenorhabditis elegans Hypothetical
           protein Y54G11A.10a protein.
          Length = 317

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +3

Query: 132 EIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 305
           E E H K   ++   +  +K   +   +L+ E+E++F  + +        LP PS  T
Sbjct: 256 EAECHEKAVDLLKSAVGSVKLVIRYMPKLLDEMERRFERQRIRSTQQSPTLPTPSSST 313


>AF098506-1|ABN43085.1|  145|Caenorhabditis elegans Hypothetical
           protein H29C22.1 protein.
          Length = 145

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 54  SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 173
           S+A ++LE N D+     E +  K  + E +NK+  + Y+
Sbjct: 33  SRAAIKLENNDDVPELFHENFEFKTCKEERYNKEQTVDYI 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,828,266
Number of Sequences: 27780
Number of extensions: 202686
Number of successful extensions: 564
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)