Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_J01
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   1.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   1.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.9  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 177 NDGNLAYSVNDLGYKILIQKMQQNKNENIVIS 272
           ND   AY  ++LGY +++   +QN++  I  S
Sbjct: 203 NDA-FAYMSDELGYGLIVYSWEQNRSWRITHS 233


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +3

Query: 426 TNDTMSKTLYANAVFVDIHSKLRDVFQDYLTRIYKGRAVNVDFSRETEVKETI 584
           ++ TMS  LY  A+  D+  KLR+    +  +    + +  D  +E E  + +
Sbjct: 309 SSTTMSNALYELALNQDVQKKLREEINTFCPK--NNKELKYDDIKEMEYLDKV 359


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +3

Query: 114 LNWSSGNSHETNDEKVTTSIINDGNL 191
           ++WS+ + H  ND      ++ +G L
Sbjct: 62  IDWSTADGHPVNDVPGVRRVLRNGTL 87


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +3

Query: 114 LNWSSGNSHETNDEKVTTSIINDGNL 191
           ++WS+ + H  ND      ++ +G L
Sbjct: 62  IDWSTADGHPVNDVPGVRRVLRNGTL 87


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 123 SSGNSHETNDEKVTTSI 173
           SS +S E+ +EK TTS+
Sbjct: 756 SSTSSEESREEKATTSL 772


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +3

Query: 441 SKTLYANAVFVDIHSKLRDVFQDYLTRIYKGRAVNVDFS--RETEVKETINE 590
           S T   + +F   H+ + DVFQ++   + +     +DF      ++K T N+
Sbjct: 392 SATAMRDPIFYRWHAFVDDVFQEHKNTLPQYTVQQLDFPGIEIADIKLTTNQ 443


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,797
Number of Sequences: 438
Number of extensions: 3167
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)