Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_I22
(376 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818 30 0.52
07_01_0446 - 3371829-3372132,3374691-3375673 29 1.2
04_04_0552 + 26195452-26195614,26195682-26195725,26198390-26199541 29 1.2
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 29 1.6
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 29 1.6
08_02_1012 + 23550314-23551504 28 2.1
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 28 2.1
02_03_0075 + 14846108-14847794,14847858-14848249 28 2.1
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 28 2.1
11_01_0034 + 254163-254251,254793-254892,255130-255231,255700-25... 28 2.7
02_05_0831 - 32071280-32071403,32071528-32071706,32071786-320718... 27 4.8
12_02_1261 + 27410921-27413401 27 6.3
08_02_1041 - 23876849-23876959,23877853-23878046,23878621-238786... 27 6.3
07_03_1499 - 26998149-26998258,26998345-26998388,26998792-269989... 27 6.3
07_01_0292 - 2117212-2117326,2117402-2117527,2117654-2117791,211... 26 8.4
04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680 26 8.4
02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033 26 8.4
>05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818
Length = 743
Score = 30.3 bits (65), Expect = 0.52
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Frame = +2
Query: 107 QARVDLEETAKVLDQDTVTMSPVIKVSDRVKEDSQAV---------IKVSGLVXEDSEAV 259
QAR+ E+ A +LDQ T+T V +++ V+ + + V +K S ED + V
Sbjct: 187 QARMFQEKEASLLDQLTLTKRTVTSLNEEVRREKELVEQLKQEIHRLKSSIAQAEDDKHV 246
Query: 260 IKVTGPVREDSEPVIKVTDPVRQDSEAVIRHSGRVKE 370
+ G +RE E + + D V S+ V ++E
Sbjct: 247 FE--GKLREKLEALDSLQDKVNLLSQEVNAKEEAIRE 281
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 219 ITACESSLTRSETLITGDMVTVSWSKTLAVSSKSTLAWSTVARTSVMR 76
IT+ SS T+S IT T WS S +T A VAR+++ R
Sbjct: 335 ITSARSSSTKSSKAITRSNST--WSLKTTTQSSNTWAAKVVARSNIAR 380
>04_04_0552 + 26195452-26195614,26195682-26195725,26198390-26199541
Length = 452
Score = 29.1 bits (62), Expect = 1.2
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -2
Query: 339 ASESCLTGSVTLITGSESSLTGPVTLITASESSXTRPETLITACESSLTRSETLITGDMV 160
AS +C T I SSL P+ L+TAS+ + + L L ITG
Sbjct: 52 ASFACALDDTTAI----SSLLEPIYLLTASKVTKESLKQLDKQRHRFLWAGTGDITGGKC 107
Query: 159 TVSWSKTLAVSSKSTL 112
V+W+KT +S+ L
Sbjct: 108 KVNWTKTCLPTSQGGL 123
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 179 KVSDRVKEDSQAVIKVSGLVXEDSEAVIKVTGPVREDSEPVIKVTDPVR 325
K++++ +E+ + + D AVI+ TG +E+S V ++ DP R
Sbjct: 39 KLAEQEEEEEKKAEEAEEAAGGDEAAVIEGTGSFKEESNLVSELPDPER 87
>03_05_0728 - 27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/86 (22%), Positives = 42/86 (48%)
Frame = +2
Query: 113 RVDLEETAKVLDQDTVTMSPVIKVSDRVKEDSQAVIKVSGLVXEDSEAVIKVTGPVREDS 292
R+ LE+ + D + + K+ + + + Q V + ++ ++ EA K E++
Sbjct: 891 RLGLEKRLRT-DLEEAKAQEIAKLQETLHDMQQQVEEAKAMIVKEREAARKAI----EEA 945
Query: 293 EPVIKVTDPVRQDSEAVIRHSGRVKE 370
PVIK T + +D+E + + V++
Sbjct: 946 PPVIKETPVLVEDTEKINSLTAEVEQ 971
>08_02_1012 + 23550314-23551504
Length = 396
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 325 PDRVRNLDYRLRILPDRARNLDYCLRILXDQARNLDYSLRILLDPVR 185
PD V + RL +L +R+ CL D AR + + L DPVR
Sbjct: 87 PDVVHSAYRRLSLLLNRSHPDRPCLHAFADAARLVAEAWAFLFDPVR 133
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 28.3 bits (60), Expect = 2.1
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = +2
Query: 86 EVLATVDQARVDLEETAKVLDQDTVTMSPVIKVSDRVKEDSQAVIKVSGLVXEDSEAVIK 265
E L +++ ++E KVL Q V+M+P +S R K Q + + DS+A +
Sbjct: 1569 EYLRRLEEKLANVESENKVLRQQAVSMAPSKILSGRSKSILQRNAESVHVSSGDSKAAPE 1628
Query: 266 ---VTGPVRE---DSEPVIKVTDPVRQDSEAVIR 349
++ P +E D +P + + +++ + +IR
Sbjct: 1629 SNNISSPKKEFDFDDKPQKSLNEKQQENQDLLIR 1662
>02_03_0075 + 14846108-14847794,14847858-14848249
Length = 692
Score = 28.3 bits (60), Expect = 2.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 84 RRFWLRWTRPGW 119
R FW+ W RPGW
Sbjct: 113 RHFWIPWFRPGW 124
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 28.3 bits (60), Expect = 2.1
Identities = 22/86 (25%), Positives = 41/86 (47%)
Frame = +2
Query: 71 AYLITEVLATVDQARVDLEETAKVLDQDTVTMSPVIKVSDRVKEDSQAVIKVSGLVXEDS 250
A T +A ++A V+ E+ KV +++T + K + K+++ A G D
Sbjct: 13 AVAATTEVAVAEKAPVEAEKEKKV-EEETPAVEAEAK--EEKKDEAAAAAAAGG----DE 65
Query: 251 EAVIKVTGPVREDSEPVIKVTDPVRQ 328
I+ TG +E+S V + DP ++
Sbjct: 66 AGAIEGTGSFKEESNLVADLPDPEKK 91
>11_01_0034 +
254163-254251,254793-254892,255130-255231,255700-255756,
255778-255783
Length = 117
Score = 27.9 bits (59), Expect = 2.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 69 RLTSLRRFWLRWTRPGWIW 125
++ +RR L W +PGW W
Sbjct: 83 QIVIMRRLLLLWQKPGWAW 101
>02_05_0831 -
32071280-32071403,32071528-32071706,32071786-32071893,
32071987-32072109,32072480-32072608,32072998-32073281,
32073783-32074094,32074208-32074340
Length = 463
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 164 MSPVIKVSDRVKEDSQAVIKVSGLVXEDSEAVIKVTGPVRE 286
+SPV++V D VK S + G ED+E + + +RE
Sbjct: 59 VSPVMRVLDEVKASSASDSDSGGRSEEDAERLASLLDELRE 99
>12_02_1261 + 27410921-27413401
Length = 826
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 288 SSLTG--PVTLITASESSXTRPETLITACESSLTRSETLITGDMVTVS 151
SSL G V T S+ S PE L+ + L + + ++TG T S
Sbjct: 776 SSLAGHSSVKKATPSDGSKQMPENLLGEMQGLLAKVDKMLTGPSATAS 823
>08_02_1041 -
23876849-23876959,23877853-23878046,23878621-23878691,
23878956-23879009,23879051-23879187
Length = 188
Score = 26.6 bits (56), Expect = 6.3
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +2
Query: 104 DQARVDLEETAKVLDQDT-VTMSPVIKVSDRVKEDS--QAVIK----VSGLVXEDSEAVI 262
D+ ++E A+V++Q VT V+D + E+ Q V++ ++ +V ED+E V
Sbjct: 88 DETARNVETAAEVVEQIAEVTEKLASNVADHLPENGCLQKVVEKIEYIAEVVDEDAEKVE 147
Query: 263 KVTGPVREDSEPVIKVTDPVRQDSE 337
+T + S+ + +P+ + E
Sbjct: 148 AITEKIENFSDKIDAKVEPIFTEIE 172
>07_03_1499 -
26998149-26998258,26998345-26998388,26998792-26998902,
26998976-26999088,26999195-26999260,26999344-26999481,
26999989-27000084,27000178-27000302,27000807-27001020
Length = 338
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 86 EVLATVDQARVDLEETAKVLDQDTVTMSPVIKVSDRVKEDSQAVIKVSGL 235
EVL +V +A ++ A +LD + + V+ VS RV D+ + + SG+
Sbjct: 57 EVLRSVARAG-STKDLAAILDTASKVLPLVVAVSGRVGSDTPLICQQSGM 105
>07_01_0292 -
2117212-2117326,2117402-2117527,2117654-2117791,
2117904-2118323,2118421-2118591,2118701-2118880,
2118988-2119140,2119226-2119384,2119841-2120152,
2120285-2120452,2120851-2121050,2122207-2122589,
2123244-2123625
Length = 968
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 221 KVSGLVXEDSEAVIKVTGPVREDSEPVIK 307
K+ G + D+EAV++ G + D+E K
Sbjct: 746 KMKGSISGDNEAVVETVGTISADNEVATK 774
>04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680
Length = 628
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Frame = +2
Query: 242 EDSEAVIKVTGPVREDSEP----VIKVTDPVRQDSE 337
+DS++ + TGPV E +EP + T+PV Q +E
Sbjct: 515 KDSKSSTRQTGPVTEQNEPDSAKMTMQTEPVAQRNE 550
>02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033
Length = 1614
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 294 SESSLTGPVTLITASESSXTRPETLITACESS 199
SESSL PV+ +++S++ ++P A +SS
Sbjct: 431 SESSLKSPVSQLSSSKALTSKPVAADAAAKSS 462
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,689,642
Number of Sequences: 37544
Number of extensions: 107550
Number of successful extensions: 435
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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