Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_I22
         (376 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       20   8.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   8.3  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = +2

Query: 68  TAYLITEVLATVDQARVDLEETAKVLDQDTVTMSPVIKVSDRV 196
           TA     ++ T+ +  VDL  T+   +   V +SP  +++ ++
Sbjct: 247 TAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQI 289


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 15/59 (25%), Positives = 22/59 (37%)
 Frame = -2

Query: 291 ESSLTGPVTLITASESSXTRPETLITACESSLTRSETLITGDMVTVSWSKTLAVSSKST 115
           E+   GP   +    S    PE         L+ +E L  G  VTV+      ++  ST
Sbjct: 403 ETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISST 461


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,606
Number of Sequences: 438
Number of extensions: 1052
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)