Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_I18
(192 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0735 + 10811326-10812342,10813199-10813555,10813962-108142... 28 1.2
04_01_0502 - 6587068-6587964 26 3.7
04_01_0034 - 401208-402923 26 4.9
07_01_0387 + 2902957-2904705 25 6.4
05_05_0011 - 21501775-21501920,21502305-21502557 25 6.4
03_05_1070 + 30125131-30127029 25 6.4
12_02_0702 - 22278513-22278751,22279054-22279889,22279932-222799... 25 8.5
10_07_0055 - 12424320-12424899,12424978-12425160,12425810-124259... 25 8.5
09_06_0216 + 21627238-21627834 25 8.5
09_04_0080 + 14393797-14393894,14395100-14395202,14395307-143954... 25 8.5
08_01_0658 - 5682425-5682832,5682878-5683000 25 8.5
07_03_1745 - 29176951-29178901,29178960-29179069,29179536-29179547 25 8.5
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733 25 8.5
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 25 8.5
04_04_0911 - 29340222-29341103 25 8.5
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 25 8.5
>03_02_0735 +
10811326-10812342,10813199-10813555,10813962-10814225,
10814894-10815010,10815796-10815944,10816315-10816606,
10816681-10816845,10817106-10817357
Length = 870
Score = 27.9 bits (59), Expect = 1.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 14 LSACIIVGSALPVDKYPVLKD 76
L AC + G+ LP+D++ KD
Sbjct: 605 LGACALAGTGLPIDRFKTAKD 625
>04_01_0502 - 6587068-6587964
Length = 298
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 83 AEVLFKENNPTVLECLIEGNDQGVKYS 163
+EV P VL C +EGND ++YS
Sbjct: 136 SEVTRINTAPRVLPCHLEGNDVVIQYS 162
>04_01_0034 - 401208-402923
Length = 571
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 7 SSIKRLHNCGL-SASRG*IPGAERPTGRGPLQGEQPNGPRM 126
S + H+CG +A A P R PL +QP+ PR+
Sbjct: 259 SPVHHHHHCGKENAPPAAKQAAAAPPMRAPLAEQQPHAPRL 299
>07_01_0387 + 2902957-2904705
Length = 582
Score = 25.4 bits (53), Expect = 6.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 95 RGPRPVGLSAPGIYPREALSP 33
+G RP+ +SAP + PR ++P
Sbjct: 39 QGARPMRVSAPPVEPRRRMNP 59
>05_05_0011 - 21501775-21501920,21502305-21502557
Length = 132
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 160 VLDSLIVSFDETFEDRWVVLLEEDLGRL 77
V +S +V+F E +RWV++ GRL
Sbjct: 31 VFESALVAFSEHTHNRWVLVASRLPGRL 58
>03_05_1070 + 30125131-30127029
Length = 632
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 97 QGEQPNGPRMSHRRKRSGSQ 156
+ EQP G R RR+R GS+
Sbjct: 21 EAEQPAGQRRRRRRRRRGSE 40
>12_02_0702 -
22278513-22278751,22279054-22279889,22279932-22279975,
22280350-22280463
Length = 410
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 100 LEEDLGRLVFQHRVFIHGKR 41
+EEDLG++ QH+VF +R
Sbjct: 47 VEEDLGKIPNQHKVFKDDER 66
>10_07_0055 -
12424320-12424899,12424978-12425160,12425810-12425958,
12426339-12426518,12426610-12426729,12427240-12427383,
12427613-12427777,12427879-12428184,12428258-12428621,
12428746-12429074
Length = 839
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 37 LSASRG*IPGAERPTGRGPLQGEQPNGPRMSHRRKRSG 150
L RG +E+P G +P+ + H RK+SG
Sbjct: 28 LPMRRGRKDKSEKPRKGGSSSSNRPSAEKAKHGRKKSG 65
>09_06_0216 + 21627238-21627834
Length = 198
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 127 SHRRKRSGSQVLLAKGWEIF 186
SH RKR+ +Q +LAK ++F
Sbjct: 108 SHYRKRAAAQDVLAKAQDVF 127
>09_04_0080 +
14393797-14393894,14395100-14395202,14395307-14395427,
14396208-14396287,14396702-14396878,14396992-14397215,
14397881-14397887,14398807-14398888,14399188-14399384
Length = 362
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 115 GPRMSHRRKRSGSQVLLAKG 174
GP SH +KR Q+LLAKG
Sbjct: 85 GPE-SHSKKREELQILLAKG 103
>08_01_0658 - 5682425-5682832,5682878-5683000
Length = 176
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 94 LQGEQPNGPRMSHRRKRSGSQVLLAKGWEI 183
++GE +G R S RR++SG Q +GW +
Sbjct: 9 VKGEVRSGRRPSERREKSGGQ----QGWRL 34
>07_03_1745 - 29176951-29178901,29178960-29179069,29179536-29179547
Length = 690
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 17 SACIIVGSALPVDKYPVLKDQPAEVLFKENNPTVLECLIEG---NDQGVKYSWQKDGK 181
++C+I+G AL ++ + E L E +P V+ ++ G + V++ W + +
Sbjct: 86 TSCVIIGRALECGRWSESVELELEGLHVELDPFVVNKVLRGLLDSGMAVRFYWWAESR 143
>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
Length = 181
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 14 LSACIIVGSALPVDKYPVLKDQPAEVLFKENNP 112
+S C V + P P L D+PAE E +P
Sbjct: 111 ISQCTAVPTPPPAPDTPTLADEPAETNEDEPSP 143
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 25.0 bits (52), Expect = 8.5
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 11 VLSACIIV---GSALPVDKYPVLKDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDG 178
VLS C + G A V + V + ++L + NP ++ G QG+KY W+ +G
Sbjct: 40 VLSICKSLFAGGVAGGVSRTAVAPLERMKILLQVQNPHSIK--YNGTIQGLKYIWRTEG 96
>04_04_0911 - 29340222-29341103
Length = 293
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 119 GPLGCSP*RGPRPVGLSAPGIYPREALSPQLCRR 18
G C P R PR ++A A S LCRR
Sbjct: 219 GASSCRPRRPPRSTSITAFARASTSATSTPLCRR 252
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3
Query: 136 FDETFEDRWVVLLEED 89
FDE+FE RWV+ ++D
Sbjct: 31 FDESFEGRWVLSGKDD 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,655,131
Number of Sequences: 37544
Number of extensions: 101156
Number of successful extensions: 372
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 14,793,348
effective HSP length: 43
effective length of database: 13,178,956
effective search space used: 263579120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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