Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_I18
(192 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 0.14
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 0.25
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 0.44
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 1.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 1.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 19 5.4
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 19 5.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 19 7.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 19 7.1
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 19 7.1
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 19 7.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 18 9.4
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.2 bits (50), Expect = 0.14
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 113 TVLECLIEGNDQGVKYSWQKDGKS 184
T L C + D + SW KDG++
Sbjct: 628 TTLTCSVTRGDLPLSISWLKDGRA 651
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 0.25
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 68 LKDQPAEVLFKENNPTVLECLIEGNDQ 148
+K+ P V F V+EC GN Q
Sbjct: 6 VKEPPNRVDFSNGTGAVVECQARGNPQ 32
Score = 22.6 bits (46), Expect = 0.44
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = +2
Query: 77 QPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGK 181
+P+ P C + GN SW KDGK
Sbjct: 313 EPSTQTIDFGRPATFTCNVRGNPIKT-VSWLKDGK 346
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 0.44
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 62 PVLKDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKS 184
P+++ + E T C + D + SW KDG+S
Sbjct: 611 PIIEPFTFQEGLSEGMRTRTVCGVAAGDPPLTISWLKDGQS 651
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.4 bits (43), Expect = 1.0
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +2
Query: 26 IIVGSALPVDKYPVLKDQPAEVLFKENNPT 115
+++G+ +DK+ A + K+N PT
Sbjct: 203 VLIGAPNEIDKFYGTPGYTAPEVIKQNRPT 232
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.0 bits (42), Expect = 1.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 104 SP*RGPRPVGLSAPGIYPREALSPQ 30
SP P G S P +YP SPQ
Sbjct: 380 SPYGYPIGSGGSFPSLYPMATTSPQ 404
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 19.0 bits (37), Expect = 5.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 165 QEYLTP*SFPSMRHSRTVGLFSLKRTSAGWSFSTGYLSTGSAEP 34
Q YLT SFPS + +V + ++ S T ST S +P
Sbjct: 378 QNYLTVHSFPSTLNIPSVKIDEDQKCSI--ESITSVNSTSSPKP 419
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 19.0 bits (37), Expect = 5.4
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +1
Query: 76 PTGRGPLQGEQPNGPRMS 129
PTG +QG++ N ++
Sbjct: 31 PTGHQEMQGKEKNSASLN 48
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 18.6 bits (36), Expect = 7.1
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 10 SIKRLHNCGLSASRG*IPGAERPT 81
S+ R L A+ PG E PT
Sbjct: 405 SVARFAETALGAAALVAPGMEEPT 428
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +2
Query: 110 PTVLECLIEGNDQGVKYS 163
PT + C+++ GV +S
Sbjct: 575 PTTVTCILQRFGVGVSFS 592
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +2
Query: 62 PVLKDQPAEVL 94
P+LK +P+EV+
Sbjct: 371 PILKAKPSEVV 381
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +2
Query: 110 PTVLECLIEGNDQGVKYS 163
PT + C+++ GV +S
Sbjct: 665 PTTVTCILQRFGVGVSFS 682
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +2
Query: 152 VKYSWQKDGK 181
+K SW+ DG+
Sbjct: 248 IKVSWRADGQ 257
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,005
Number of Sequences: 438
Number of extensions: 970
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used: 2550180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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