Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_I17
(269 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 31 0.095
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 31 0.095
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 31 0.095
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 31 0.095
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 31 0.095
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 29 0.39
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 29 0.51
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 29 0.51
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 29 0.51
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 28 1.2
10_08_0514 + 18465474-18465760,18465888-18465978,18466670-184667... 26 4.7
05_02_0148 - 7085892-7086011,7086681-7087004,7088258-7088419,708... 26 4.7
02_05_1301 + 35564106-35564368,35564479-35564560,35564831-355650... 26 4.7
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 25 6.3
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 31.5 bits (68), Expect = 0.095
Identities = 21/36 (58%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 156 KKEMKY-DGWFDAAGKTTILYNSN**N-VTTIPTMG 257
KKEM+ DAAGKTTILY VTTIPT+G
Sbjct: 138 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 173
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 31.5 bits (68), Expect = 0.095
Identities = 21/36 (58%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 156 KKEMKY-DGWFDAAGKTTILYNSN**N-VTTIPTMG 257
KKEM+ DAAGKTTILY VTTIPT+G
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 31.5 bits (68), Expect = 0.095
Identities = 21/36 (58%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 156 KKEMKY-DGWFDAAGKTTILYNSN**N-VTTIPTMG 257
KKEM+ DAAGKTTILY VTTIPT+G
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 31.5 bits (68), Expect = 0.095
Identities = 21/36 (58%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 156 KKEMKY-DGWFDAAGKTTILYNSN**N-VTTIPTMG 257
KKEM+ DAAGKTTILY VTTIPT+G
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 31.5 bits (68), Expect = 0.095
Identities = 21/36 (58%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 156 KKEMKY-DGWFDAAGKTTILYNSN**N-VTTIPTMG 257
KKEM+ DAAGKTTILY VTTIPT+G
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 29.5 bits (63), Expect = 0.39
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 144 FXGXKKEMKYDGWFDAAGKTTILYNSN**NV-TTIPTMG 257
F G K+ DAAGKTTILY + V +T+PT+G
Sbjct: 12 FFGNKEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIG 50
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 29.1 bits (62), Expect = 0.51
Identities = 20/35 (57%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 156 KKEMKY-DGWFDAAGKTTILYNSN**N-VTTIPTM 254
KKEM+ DAAGKTTILY VTTIPT+
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 29.1 bits (62), Expect = 0.51
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 186 DAAGKTTILYNSN**NV-TTIPTMG 257
DAAGKTTILY + V +T+PT+G
Sbjct: 26 DAAGKTTILYKLHIGEVLSTVPTIG 50
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 29.1 bits (62), Expect = 0.51
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 186 DAAGKTTILYNSN**NV-TTIPTMG 257
DAAGKTTILY + V +T+PT+G
Sbjct: 26 DAAGKTTILYRLHMGEVLSTVPTVG 50
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 186 DAAGKTTILYNSN**NV-TTIPTMG 257
DAAGKTTILY + V ++IPT+G
Sbjct: 25 DAAGKTTILYRLHIGEVLSSIPTIG 49
>10_08_0514 +
18465474-18465760,18465888-18465978,18466670-18466767,
18466852-18466949,18468192-18468321,18468410-18468597,
18470291-18470323,18470627-18471000,18471116-18471294,
18471421-18471532,18471655-18471771,18471875-18472189,
18472405-18472743
Length = 786
Score = 25.8 bits (54), Expect = 4.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 27 NFIEFSECSFFLNSXKPLLLKNTIRKA*NG 116
NF+ EC + ++ KP + K+T+ A G
Sbjct: 124 NFLSKEECEYLISLAKPHMKKSTVVDASTG 153
>05_02_0148 -
7085892-7086011,7086681-7087004,7088258-7088419,
7088866-7089066,7089148-7089332,7089459-7089588
Length = 373
Score = 25.8 bits (54), Expect = 4.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 122 IFPILCFANSIFQKQRFXR 66
I P+LCF +F K R+ R
Sbjct: 111 IIPVLCFLEILFDKVRYSR 129
>02_05_1301 +
35564106-35564368,35564479-35564560,35564831-35565026,
35565286-35565415,35565508-35565695,35565856-35565944,
35566841-35567023
Length = 376
Score = 25.8 bits (54), Expect = 4.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 27 NFIEFSECSFFLNSXKPLLLKNTI 98
NF+ EC + + KP ++K+T+
Sbjct: 113 NFLSKEECDYLIGLAKPHMVKSTV 136
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 184 LMLLVKLQFYTTQISEMLQQFPL 252
L+ L +L ++T ++E LQQFP+
Sbjct: 589 LLTLTELGSFSTYVNENLQQFPV 611
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,328,524
Number of Sequences: 37544
Number of extensions: 91353
Number of successful extensions: 146
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 14,793,348
effective HSP length: 68
effective length of database: 12,240,356
effective search space used: 257047476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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