Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_I17
(269 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 31 0.11
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 31 0.15
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 31 0.15
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 31 0.15
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 29 0.45
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 1.4
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 27 1.4
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 27 1.8
Z66521-12|CAA91397.3| 614|Caenorhabditis elegans Hypothetical p... 27 2.4
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 25 5.6
U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle abno... 25 5.6
S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein. 25 5.6
Z29117-6|CAA82378.1| 176|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z99283-5|CAE46680.1| 308|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z99283-4|CAB16534.1| 342|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF078788-4|AAC26961.1| 342|Caenorhabditis elegans Hypothetical ... 25 9.7
AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical ... 25 9.7
AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical ... 25 9.7
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/25 (68%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 186 DAAGKTTILYNSN-**NVTTIPTMG 257
DAAGKTTILY +VTTIPT+G
Sbjct: 22 DAAGKTTILYKLKLGQSVTTIPTVG 46
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 30.7 bits (66), Expect = 0.15
Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +3
Query: 186 DAAGKTTILYNSN**N-VTTIPTMG 257
DAAGKTTILY VTTIPT+G
Sbjct: 26 DAAGKTTILYKLKLGEIVTTIPTIG 50
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 30.7 bits (66), Expect = 0.15
Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +3
Query: 186 DAAGKTTILYNSN**N-VTTIPTMG 257
DAAGKTTILY VTTIPT+G
Sbjct: 26 DAAGKTTILYKLKLGEIVTTIPTIG 50
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 30.7 bits (66), Expect = 0.15
Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +3
Query: 186 DAAGKTTILYNSN**N-VTTIPTMG 257
DAAGKTTILY VTTIPT+G
Sbjct: 26 DAAGKTTILYKLKLGEIVTTIPTIG 50
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 29.1 bits (62), Expect = 0.45
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 186 DAAGKTTILYNSN**N-VTTIPTMG 257
D AGKTTILY VTTIPT+G
Sbjct: 25 DGAGKTTILYRLQVGEVVTTIPTIG 49
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 241 VVTFH*FELYRIVVLPAASNQPSYFISFLXPXKGL 137
+V +H LY+ V P +N YF P KGL
Sbjct: 365 LVDYHGHSLYKAVASPHRTNPNMYFAGPFVPPKGL 399
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 241 VVTFH*FELYRIVVLPAASNQPSYFISFLXPXKGL 137
+V +H LY+ V P +N YF P KGL
Sbjct: 365 LVDYHGHSLYKAVASPHRTNPNMYFAGPFVPPKGL 399
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 241 VVTFH*FELYRIVVLPAASNQPSYFISFLXPXKGL 137
+V +H LY+ V P +N YF P KGL
Sbjct: 365 LVDYHGHSLYKAVASPHRTNPNMYFAGPFVPPKGL 399
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 241 VVTFH*FELYRIVVLPAASNQPSYFISFLXPXKGL 137
+V +H LY+ V P +N YF P KGL
Sbjct: 365 LVDYHGHSLYKAVASPHRTNPNMYFAGPFVPPKGL 399
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 241 VVTFH*FELYRIVVLPAASNQPSYFISFLXPXKGL 137
+V +H LY+ V P +N YF P KGL
Sbjct: 365 LVDYHGHSLYKAVASPHRTNPNMYFAGPFVPPKGL 399
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/25 (60%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 186 DAAGKTTILYNSN-**NVTTIPTMG 257
D AGKTTILY V TIPT+G
Sbjct: 26 DGAGKTTILYKLKLNETVNTIPTIG 50
>Z66521-12|CAA91397.3| 614|Caenorhabditis elegans Hypothetical
protein W02B12.4 protein.
Length = 614
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 9 PF*HPTNFIEFSECSFFLNSXKPLLLKNTIRK 104
P P N EFSE ++N KP L NT RK
Sbjct: 93 PAARPVNISEFSEDCLYMNILKPSGL-NTFRK 123
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/25 (60%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 186 DAAGKTTILYN-SN**NVTTIPTMG 257
D AGKTTILYN V T PT+G
Sbjct: 26 DNAGKTTILYNYVTKDQVETKPTIG 50
>U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle
abnormal protein 5 protein.
Length = 228
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = +3
Query: 21 PTNFIEFSECSFFL-----NSXKPLLLKNTIR 101
P+N+I +EC+++L N + LL K T+R
Sbjct: 49 PSNYIRMTECNWYLGKITRNDAEVLLKKPTVR 80
>S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein.
Length = 228
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = +3
Query: 21 PTNFIEFSECSFFL-----NSXKPLLLKNTIR 101
P+N+I +EC+++L N + LL K T+R
Sbjct: 49 PSNYIRMTECNWYLGKITRNDAEVLLKKPTVR 80
>Z29117-6|CAA82378.1| 176|Caenorhabditis elegans Hypothetical
protein C48B4.6 protein.
Length = 176
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 191 SIKPTIIXXXXXXPXKGPLNNCNIFPIL 108
SIKP ++ P NNCN++P+L
Sbjct: 155 SIKPKLVAAV------NPSNNCNVYPML 176
>Z99283-5|CAE46680.1| 308|Caenorhabditis elegans Hypothetical
protein Y70C5C.6b protein.
Length = 308
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 143 GPLNNCNIFPILCF 102
G LNNCNIF + F
Sbjct: 88 GSLNNCNIFELTSF 101
>Z99283-4|CAB16534.1| 342|Caenorhabditis elegans Hypothetical
protein Y70C5C.6a protein.
Length = 342
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 143 GPLNNCNIFPILCF 102
G LNNCNIF + F
Sbjct: 122 GSLNNCNIFELTSF 135
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 140 PLNNCNIFPILCFANS 93
P NCN+ P +C AN+
Sbjct: 1153 PATNCNLEPRICHANA 1168
>AF078788-4|AAC26961.1| 342|Caenorhabditis elegans Hypothetical
protein ZC190.2 protein.
Length = 342
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 137 LNNCNIFPILCFANSIFQKQRFXRIQEKATLREFY 33
LN C +F + A I+Q QR + + L + Y
Sbjct: 180 LNGCIVFSLFYTAKEIYQNQRSAPLHVRYELFQSY 214
>AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical
protein R119.5 protein.
Length = 659
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 112 FYALRIVFFRSKGXLEFKKKLHSENSIKFV 23
F+ LR+VFFR LEF + IK +
Sbjct: 418 FFTLRLVFFRFLKILEFNNFFRLKLRIKTI 447
>AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical
protein C14C6.7 protein.
Length = 509
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1
Query: 113 ILCFANSIFQKQRFXRIQEKATL 45
++CF+N+IF ++ F I A++
Sbjct: 32 LICFSNTIFSQEDFFEITTPASI 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,789,019
Number of Sequences: 27780
Number of extensions: 92789
Number of successful extensions: 202
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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