Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_I15
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92830-8|CAB07353.1|  537|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z48783-8|CAA88702.2|  308|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z48582-7|CAA88468.2|  308|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z50741-6|CAA90613.3|  331|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AL032630-15|CAA21571.3|  331|Caenorhabditis elegans Hypothetical...    28   3.4  
U56965-9|AAB52662.2|  265|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U40955-1|AAA81747.3|  233|Caenorhabditis elegans Hypothetical pr...    28   4.6  

>Z92830-8|CAB07353.1|  537|Caenorhabditis elegans Hypothetical
           protein F11A5.9 protein.
          Length = 537

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -1

Query: 372 IFSCSLSNFNMECSFNENRIAMIALHKMCMGRQTYSRHFKSFVLPVCSYIVLSTDT 205
           IFSCS+  FN    F  + I     +   MG  ++     + + PV   I ++ DT
Sbjct: 413 IFSCSIIGFNCGAFFRSSAIYAAQHNHFIMGVNSFLNCLAALLAPVIVNIFVANDT 468


>Z48783-8|CAA88702.2|  308|Caenorhabditis elegans Hypothetical
           protein F27E5.2 protein.
          Length = 308

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -3

Query: 256 QKLCITRMFVYRTINRYNNTSSVQD*QRSGWPRAVRTTEAV 134
           ++L ++   V + +NRY  T S+   Q  G PRA  T +AV
Sbjct: 53  RQLKVSHGAVSKILNRYAETGSISPGQIGGSPRARLTVQAV 93


>Z48582-7|CAA88468.2|  308|Caenorhabditis elegans Hypothetical
           protein F27E5.2 protein.
          Length = 308

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -3

Query: 256 QKLCITRMFVYRTINRYNNTSSVQD*QRSGWPRAVRTTEAV 134
           ++L ++   V + +NRY  T S+   Q  G PRA  T +AV
Sbjct: 53  RQLKVSHGAVSKILNRYAETGSISPGQIGGSPRARLTVQAV 93


>Z50741-6|CAA90613.3|  331|Caenorhabditis elegans Hypothetical
           protein Y62H9A.14 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = -2

Query: 476 EYCYIKTFLATF**F*IWNTYIIVKTSFDFAPFHIFFRVHYQISIWNVVL 327
           ++  I TFL  +    IW+ Y   KT  +F+   +F  VH ++++++ +L
Sbjct: 102 DWSMIGTFLTEYCRASIWSLYCNPKTGAEFSTGPVFKDVHIEVTMFDNLL 151


>AL032630-15|CAA21571.3|  331|Caenorhabditis elegans Hypothetical
           protein Y62H9A.14 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = -2

Query: 476 EYCYIKTFLATF**F*IWNTYIIVKTSFDFAPFHIFFRVHYQISIWNVVL 327
           ++  I TFL  +    IW+ Y   KT  +F+   +F  VH ++++++ +L
Sbjct: 102 DWSMIGTFLTEYCRASIWSLYCNPKTGAEFSTGPVFKDVHIEVTMFDNLL 151


>U56965-9|AAB52662.2|  265|Caenorhabditis elegans Hypothetical
           protein C15H9.2 protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 450 GNFLMILNLEHVYYCKNFFRFC 385
           GN + +L L H + CKN   FC
Sbjct: 197 GNIVELLELSHFFDCKNVTMFC 218


>U40955-1|AAA81747.3|  233|Caenorhabditis elegans Hypothetical
           protein F48B9.5 protein.
          Length = 233

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 256 QKLCITRMFVYRTINRYNNTSSVQD*QRSGWPRAVRTTEAVNAVKARI---RRNPIRKQK 86
           ++LC+T   V + +NRY  T SV+               AV   ++R+   R++ IR+Q 
Sbjct: 137 KRLCVTHSCVSKILNRYRQTGSVKPKDAKEGRTESPLVLAVRDYRSRLGMCRQSEIREQL 196

Query: 85  I 83
           I
Sbjct: 197 I 197


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,641,013
Number of Sequences: 27780
Number of extensions: 236473
Number of successful extensions: 579
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)