Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_I13
(554 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 28 0.80
SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr 3... 28 0.80
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 27 1.9
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 27 2.5
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 26 4.3
SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|... 26 4.3
SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase ... 25 7.5
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 7.5
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 9.9
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 25 9.9
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 28.3 bits (60), Expect = 0.80
Identities = 16/78 (20%), Positives = 41/78 (52%)
Frame = +2
Query: 203 QSLISPKGSSIWTMEELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSIKVYVR 382
+ ++S + S T+ +++ A+++ ST+ + P + Y++ N+P +S+ V +
Sbjct: 190 KKVLSAEDSVRETITDIETALQNMSTSASRTPNDSSPLPYIE------NRPASSLAVSEK 243
Query: 383 AMDISTWTLAELNEAIAN 436
++ W+ E+ E + N
Sbjct: 244 IQNVPNWSTEEVVEWLMN 261
>SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 455
Score = 28.3 bits (60), Expect = 0.80
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 302 ITESYRYLKSTHEHGNKPENSIKVYVRAMDISTW--TLAELNEAIANPATNPELIHYLET 475
++E +LK H + PE +K+ + TW LN+AI+N +N +
Sbjct: 381 LSELIDFLKREHPPEDTPEKRVKIKRIRTLLDTWQQEWRILNKAISNAESNS---GRGQN 437
Query: 476 ARTRLTSESEFQNKET 523
++T+ TS + +NK T
Sbjct: 438 SKTKTTSVNLSRNKRT 453
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 27.1 bits (57), Expect = 1.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 248 ELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSIKVY 376
E DE +K+PS + S YL ++ N+PEN K +
Sbjct: 282 EDDELVKNPSVTKGHPEIHESSENYLSRSNTVENEPENIEKQF 324
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 26.6 bits (56), Expect = 2.5
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 84 ELEKVLHDKNFDPELKPYLEEAFNAIVYSMFTNKIWI*LAKASFPLKDLLY 236
E + K PELKP L EAF I ++ K+ +K + PL++++Y
Sbjct: 531 ERSSISPSKPLSPELKPLLNEAFQDIEKTL--QKLMPVASKLN-PLEEVMY 578
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 25.8 bits (54), Expect = 4.3
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 281 NPNYLPAITESYRYLKSTHEHGNKPENSIKVYVRAMDISTWTLAELNEAIAN---PATNP 451
+PNY PA T Y + H+ + K + +A ++ + E EA+A A
Sbjct: 571 DPNYAPAYTSLGLYYRDIHD----MVRATKCFQKAFELDA-SQVEAAEALAKTFAEANEW 625
Query: 452 ELIHYLETARTRLTSESEFQNKE 520
EL+ + + R TSE++ + K+
Sbjct: 626 ELVEVI-SRRVLNTSENDLKRKK 647
>SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 540
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/47 (23%), Positives = 28/47 (59%)
Frame = +2
Query: 227 SSIWTMEELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSI 367
S+ +E+ +++IK+ + N N+ + E+Y+ + H+ + P N++
Sbjct: 96 STTLNLEKTNDSIKE-TKNENFRMDVLETYKCKQLNHQTTHLPTNTV 141
>SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase
Ade6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 552
Score = 25.0 bits (52), Expect = 7.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 443 TNPELIHYLETARTRLTSESEFQNKETISIVTK 541
T+P+ I L T LT+E E N + ++ VTK
Sbjct: 55 TDPDAIVELSKKCTLLTTEIEHINTDALAAVTK 87
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 7.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 81 DELEKVLHDKNFDPELKPYLE 143
D L++V HD D ELK +LE
Sbjct: 303 DTLKQVQHDAENDEELKDWLE 323
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 24.6 bits (51), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 245 EELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKP 355
EEL ++I+ T+P+ P I + L EH +KP
Sbjct: 1185 EELVKSIEIALTSPHISPEIIQILLNLAEFMEHDDKP 1221
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 24.6 bits (51), Expect = 9.9
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 263 IKDPSTNPNYLPAITESYRYLK--STHEHGNKPENSIKV-YVRAMDISTWTLA-ELNEAI 430
+KD +NP P + S ++LK + +G + SIK+ + +++ W ++ + + I
Sbjct: 856 MKDSHSNPPVSPKYSSSQKHLKVERINIYGEQTRKSIKIRKIIDSEVTEWDVSVDDSGCI 915
Query: 431 ANP 439
NP
Sbjct: 916 RNP 918
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,062,071
Number of Sequences: 5004
Number of extensions: 39352
Number of successful extensions: 116
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 231978230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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