Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_I12
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    27   0.14 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.74 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.74 
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            23   2.3  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   5.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.1  

>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 10/49 (20%), Positives = 27/49 (55%)
 Frame = -1

Query: 157 LTNGMISIWLQDNHIAHISISECGKMIYHIFCIVYVSYSDAYQNLRYPS 11
           +T  ++++WL+ +    + I+     I H+FC++ V +   +  ++ P+
Sbjct: 258 MTMTLMTLWLEPSSTERMIIANLN-FILHLFCLLDVQWRIPFNGIQMPN 305


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 581 KGDTGYYGCRATNEHG 534
           KGD G Y C A N+ G
Sbjct: 581 KGDAGVYTCSARNKQG 596



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 575 DTGYYGCRATNEHGDKYFETLLQV 504
           D G Y C A+N  G+   E  L V
Sbjct: 304 DNGIYRCSASNPGGEASAEIRLIV 327



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 590 GVHKGDTGYYGCRATNEHGD 531
           G+++ D G Y C      GD
Sbjct: 388 GINREDRGMYQCIVRRSEGD 407


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 581 KGDTGYYGCRATNEHG 534
           KGD G Y C A N+ G
Sbjct: 581 KGDAGVYTCSARNKQG 596



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 575 DTGYYGCRATNEHGDKYFETLLQV 504
           D G Y C A+N  G+   E  L V
Sbjct: 304 DNGIYRCSASNPGGEASAEIRLIV 327



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 590 GVHKGDTGYYGCRATNEHGD 531
           G+++ D G Y C      GD
Sbjct: 388 GINREDRGMYQCIVRRSEGD 407


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 575 DTGYYGCRATNEH 537
           D GYY C+A N++
Sbjct: 94  DAGYYECQADNQY 106


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 593 KGVHKGDTGYYGCRATNEHGDK 528
           + V K +   Y  +A+ EHG+K
Sbjct: 191 QSVEKSELWVYKSKASEEHGNK 212


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 575 DTGYYGCRATNEHGDKYFETLLQV 504
           D+G Y C   N  G +  ET+L V
Sbjct: 281 DSGKYLCIVNNSVGGESVETVLTV 304



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 587 VHKGDTGYYGCRATNEHG 534
           + K + GYY C A N  G
Sbjct: 745 IQKTNEGYYLCEAVNGIG 762


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 151 NGMISIWLQDNHIAHISISECGK 83
           NG ++ W+  NH  H   S  G+
Sbjct: 342 NGSVTNWVSGNHDNHRVASRFGR 364


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 593 KGVHKGDTGYYGCRATNEHG 534
           K V   DTG Y C+A++  G
Sbjct: 462 KNVDYADTGAYMCQASSIGG 481


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,947
Number of Sequences: 438
Number of extensions: 2274
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)